myRT

myRT report for GCA_001334235.1_6930_7_11

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Seq: CVHB01000035.1 Streptococcus pneumoniae genome assembly 6930_7#11, scaffold ERS096210SCcontig000035, whole genome shotgun sequence (18116 bp)
Overview 1 RT 1: 13686-17220 bp Neighborhood of RT #1 [13686, 17390] COG5340 AbiEii RVT-GII cas_Csn1 Feature: gene Location: 13686-14276 bp Feature: domain Description: COG5340 Location: 13689-14121 bp Feature: domain Description: COG5340 Location: 1 3689-1 41 21 bp Feature: gene Location: 14273-15118 bp Feature: domain Description: AbiEii Location: 14372-15071 bp Feature: domain Description: AbiEii Location: 1 4372-1 5071 bp Feature: gene Location: 15468-17390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15795-16530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5795-1 6530 bp Feature: domain Description: cas_Csn1 Location: 16941-17220 bp Feature: domain Description: cas_Csn1 Location: 1 6941 -1 7220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865)

Seq: CVHB01000027.1 Streptococcus pneumoniae genome assembly 6930_7#11, scaffold ERS096210SCcontig000027, whole genome shotgun sequence (32531 bp)
Overview 1 RT 1: 21419-28728 bp Neighborhood of RT #1 [21419, 28730] EriC TrkA_C xerS RVT-GII GIIM LuxS COG4868 Feature: gene Location: 21419-22969 bp Feature: domain Description: EriC Location: 21512-22724 bp Feature: domain Description: EriC Location: 2 1512 -2 2 72 4 bp Feature: domain Description: TrkA_C Location: 22769-22964 bp Feature: domain Description: TrkA_C Location: 2 2 769-2 2 964 bp Feature: gene Location: 23553-24623 bp Feature: domain Description: xerS Location: 23556-24621 bp Feature: domain Description: xerS Location: 2 3556-2 462 1 bp Feature: gene Location: 25325-26503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25529-26144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 552 9-2 6144 bp Feature: domain Description: GIIM Note: maturase Location: 26198-26411 bp Feature: domain Description: GIIM Note: maturase Location: 2 6198-2 6411 bp Feature: gene Location: 26669-27151 bp Feature: domain Description: LuxS Location: 26687-27146 bp Feature: domain Description: LuxS Location: 2 6687-2 7146 bp Feature: gene Location: 27246-28730 bp Feature: domain Description: COG4868 Location: 27252-28728 bp Feature: domain Description: COG4868 Location: 2 72 52 -2 872 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EriC (cd01031), TrkA_C (pfam02080), xerS (PRK05084), RVT-GII, GIIM (pfam08388), LuxS (pfam02664), COG4868 (Uncharacterized protein, UPF0371 family )