myRT

myRT report for GCA_001337555.1_6755_4_2

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Seq: CHUN01000042.1 Streptococcus pneumoniae genome assembly 6755_4#2, scaffold ERS020640SCcontig000042, whole genome shotgun sequence (16509 bp)
Overview 1 RT 1: 7209-15122 bp Neighborhood of RT #1 [7209, 15127] GlpF RVT-GII GIIM MFS_MefA_like PRK04813 Feature: gene Location: 7209-7913 bp Feature: domain Description: GlpF Location: 7212-7908 bp Feature: domain Description: GlpF Location: 721 2-7908 bp Feature: gene Location: 8500-9159 bp Feature: gene Location: 10196-11473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10400-11015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0400-1 1 01 5 bp Feature: domain Description: GIIM Note: maturase Location: 11069-11282 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 069-1 1 282 bp Feature: gene Location: 11933-13111 bp Feature: domain Description: MFS_MefA_like Location: 11948-13091 bp Feature: domain Description: MFS_MefA_like Location: 1 1 948-1 3091 bp Feature: gene Location: 13577-15127 bp Feature: domain Description: PRK04813 Location: 13595-15122 bp Feature: domain Description: PRK0481 3 Location: 1 3595-1 51 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MFS_MefA_like (cd06173), PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA)

Seq: CHUN01000010.1 Streptococcus pneumoniae genome assembly 6755_4#2, scaffold ERS020640SCcontig000010, whole genome shotgun sequence (67627 bp)
Overview 1 RT 1: 19584-28841 bp Neighborhood of RT #1 [19584, 29023] COG5340 AbiEii RVT-GII KOG4768 cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 19584-20174 bp Feature: domain Description: COG5340 Location: 19587-20019 bp Feature: domain Description: COG5340 Location: 19587-2 0019 bp Feature: gene Location: 20171-21016 bp Feature: domain Description: AbiEii Location: 20270-20969 bp Feature: domain Description: AbiEii Location: 2 02 70-2 0969 bp Feature: gene Location: 21366-23288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21693-22428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1693-2 2 42 8 bp Feature: domain Description: KOG4768 Location: 22575-22680 bp Feature: domain Description: KOG4768 Location: 2 2 575-2 2 680 bp Feature: domain Description: cas_Csn1 Location: 22836-23118 bp Feature: domain Description: cas_Csn1 Location: 2 2 836-2 3118 bp Feature: gene Location: 23997-26675 bp Feature: domain Description: Peptidase_M23 Location: 25443-25647 bp Feature: domain Description: Peptidase_M2 3 Location: 2 5443-2 5647 bp Feature: domain Description: Phage_lysozyme2 Location: 25800-26310 bp Feature: domain Description: Phage_lysozyme2 Location: 2 5800-2 6310 bp Feature: domain Description: COG3942 Location: 26385-26658 bp Feature: domain Description: COG3942 Location: 2 6385-2 6658 bp Feature: gene Location: 26672-29023 bp Feature: domain Description: TraC-F-type Location: 27458-28841 bp Feature: domain Description: TraC-F-type Location: 2 7458-2 8841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)