myRT

myRT report for GCA_001343875.1_6925_5_11

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Seq: CGYW01000041.1 Streptococcus pneumoniae genome assembly 6925_5#11, scaffold ERS021681SCcontig000041, whole genome shotgun sequence (13562 bp)
Overview 1 RT 1: 310-4399 bp Neighborhood of RT #1 [310, 4416] RVT-GII GIIM lipoyltrans AceF lipoamide_DH Feature: gene Location: 310-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514-1129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 4-1 1 29 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1396 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 83-1 396 bp Feature: gene Location: 1653-2642 bp Feature: domain Description: lipoyltrans Location: 1665-2613 bp Feature: domain Description: lipoyltrans Location: 1 665-261 3 bp Feature: gene Location: 2713-4416 bp Feature: domain Description: AceF Location: 2716-3013 bp Feature: domain Description: AceF Location: 271 6-301 3 bp Feature: domain Description: lipoamide_DH Location: 3049-4399 bp Feature: domain Description: lipoamide_DH Location: 3049-4399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lipoyltrans (TIGR00545), AceF (COG0508), lipoamide_DH (TIGR01350), RVT-GII, GIIM (pfam08388)

Seq: CGYW01000020.1 Streptococcus pneumoniae genome assembly 6925_5#11, scaffold ERS021681SCcontig000020, whole genome shotgun sequence (40961 bp)
Overview 1 RT 1: 28153-35471 bp Neighborhood of RT #1 [28153, 35623] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type Feature: gene Location: 28153-28743 bp Feature: domain Description: COG5340 Location: 28156-28588 bp Feature: domain Description: COG5340 Location: 2 8156-2 8588 bp Feature: gene Location: 28740-29585 bp Feature: domain Description: AbiEii Location: 28839-29538 bp Feature: domain Description: AbiEii Location: 2 8839-2 9538 bp Feature: gene Location: 29935-31857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30262-30997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 62 -30997 bp Feature: domain Description: cas_Csn1 Location: 31408-31687 bp Feature: domain Description: cas_Csn1 Location: 31408-31687 bp Feature: gene Location: 32566-35253 bp Feature: domain Description: Peptidase_M23 Location: 33979-34183 bp Feature: domain Description: Peptidase_M2 3 Location: 33979-34183 bp Feature: domain Description: Phage_lysozyme2 Location: 34354-34894 bp Feature: domain Description: Phage_lysozyme2 Location: 34354-34894 bp Feature: domain Description: PRK08581 Location: 35020-35236 bp Feature: domain Description: PRK08581 Location: 3502 0-352 36 bp Feature: gene Location: 35264-35623 bp Feature: domain Description: TraC-F-type Location: 35279-35471 bp Feature: domain Description: TraC-F-type Location: 352 79-35471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746)