myRT

myRT report for GCA_001360335.1_10071_3_86

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Seq: CGTA01000041.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 10071_3#86, scaffold ERS223406SCcontig000041, whole genome shotgun sequence (3164 bp)
Overview 1 RT 1: 174-2487 bp Neighborhood of RT #1 [174, 3128] L1-EN RVT-UNC Feature: gene Location: 174-3128 bp Ori: CFY99454.1 Feature: domain Description: L1-EN Location: 249-981 bp Feature: domain Description: L1 -EN Location: 249-981 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1857-2487 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 857-2487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG3/RVT-GII/RVT-DGRs/RVT-CRISPR(RVT-UNC)

Seq: CGTA01000026.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 10071_3#86, scaffold ERS223406SCcontig000026, whole genome shotgun sequence (48609 bp)
Overview 1 RT 1: 43429-48238 bp Neighborhood of RT #1 [43429, 48238] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-UG11 Feature: gene Location: 43429-45585 bp Ori: CFY98579.1 Gene: apxIB_2 Feature: domain Description: type_I_sec_LssB Location: 43489-45562 bp Feature: domain Description: type_I_sec_LssB Location: 43489-45562 bp Feature: gene Location: 45590-46780 bp Ori: CFY98581.1 Gene: prsE_2 Feature: domain Description: type_I_hlyD Location: 45671-46115 bp Feature: domain Description: type_I_hlyD Location: 45671-46115 bp Feature: domain Description: type_I_hlyD Location: 46154-46778 bp Feature: domain Description: type_I_hlyD Location: 46154-46778 bp Feature: gene Location: 47323-48096 bp Ori: CFY98584.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 47458-47911 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 47458-47911 bp Feature: gene Location: 48065-48238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-UG11