myRT

myRT report for GCA_001368815.1_PRJEB5513_assembly_1

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Seq: CTEI01000002.1 Paraliobacillus sp. PM-2 genome assembly PRJEB5513_assembly_1, contig CONTIG000002, whole genome shotgun sequence (735559 bp)
Overview 1 RT 1: 712590-717020 bp Neighborhood of RT #1 [712590, 717020] RVT-GII HNHc Feature: gene Location: 712590-713126 bp Feature: gene Location: 713402-713641 bp Feature: gene Location: 713869-715665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714160-714859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 41 60-71 4859 bp Feature: domain Description: HNHc Note: nucleases Location: 715399-715552 bp Feature: domain Description: HNHc Note: nucleases Location: 71 5399-71 5552 bp Feature: gene Location: 716397-716555 bp Feature: gene Location: 716658-717020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: CTEI01000001.1 Paraliobacillus sp. PM-2 genome assembly PRJEB5513_assembly_1, contig CONTIG000001, whole genome shotgun sequence (1896334 bp)
Overview 1 RT 1: 822773-827965 bp 2 RT 2: 883144-891463 bp Neighborhood of RT #1 [822773, 828048] CwlO1 NLPC_P60 RVT-GII GIIM YphP_YqiW CheX Neighborhood of RT #2 [883144, 891669] RVT-GII GIIM DEXHc_RE Mod Mod Feature: gene Location: 822773-823966 bp Feature: domain Description: CwlO1 Location: 822803-823556 bp Feature: domain Description: CwlO1 Location: 82 2 803-82 3556 bp Feature: domain Description: NLPC_P60 Location: 823631-823952 bp Feature: domain Description: NLPC_P60 Location: 82 3631-82 3952 bp Feature: gene Location: 824424-824525 bp Feature: gene Location: 825408-826796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825729-826344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 572 9-82 6344 bp Feature: domain Description: GIIM Note: maturase Location: 826401-826611 bp Feature: domain Description: GIIM Note: maturase Location: 82 6401-82 6611 bp Feature: gene Location: 826923-827348 bp Feature: domain Description: YphP_YqiW Location: 826944-827340 bp Feature: domain Description: YphP_YqiW Location: 82 6944-82 7340 bp Feature: gene Location: 827590-828048 bp Feature: domain Description: CheX Location: 827611-827965 bp Feature: domain Description: CheX Location: 82 7611-82 7965 bp Feature: gene Location: 883144-883746 bp Feature: gene Location: 883767-884111 bp Feature: gene Location: 884583-885971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884904-885519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884904-885519 bp Feature: domain Description: GIIM Note: maturase Location: 885576-885786 bp Feature: domain Description: GIIM Note: maturase Location: 885576-885786 bp Feature: gene Location: 886071-888995 bp Feature: domain Description: DEXHc_RE Location: 886386-886872 bp Feature: domain Description: DEXHc_RE Location: 886386-886872 bp Feature: gene Location: 888982-891669 bp Feature: domain Description: Mod Location: 889831-890503 bp Feature: domain Description: Mod Location: 889831-890503 bp Feature: domain Description: Mod Location: 891055-891463 bp Feature: domain Description: Mod Location: 891055-891463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlO1 (COG3883), NLPC_P60 (pfam00877), RVT-GII, GIIM (pfam08388), YphP_YqiW (TIGR04191), CheX (pfam13690), DEXHc_RE (cd17926), Mod (COG2189)