myRT

myRT report for GCA_001372875.1_SSCC35109

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Seq: CDNF01000003.1 [Clostridium] sordellii genome assembly SSCC35109, contig SSCC35109_1, whole genome shotgun sequence (1789940 bp)
Overview 1 RT 1: 1236040-1243193 bp Neighborhood of RT #1 [1236040, 1243675] zf-ribbon_3 DUF4003 RVT-UG5 nitrilase nitrilase HTH_XRE Feature: gene Location: 1236040-1236714 bp Ori: CEO08397.1 Feature: domain Description: zf-ribbon_3 Location: 1236049-1236115 bp Feature: domain Description: zf-ribbon_3 Location: 1 236049-1 2361 1 5 bp Feature: gene Location: 1236832-1237833 bp Ori: CEO08400.1 Feature: domain Description: DUF4003 Location: 1236880-1237771 bp Feature: domain Description: DUF4003 Location: 1 236880-1 237771 bp Feature: gene Location: 1238064-1241888 bp Ori: CEO08402.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1238604-1239120 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 238604-1 2391 20 bp Feature: domain Description: nitrilase Location: 1241037-1241127 bp Feature: domain Description: nitrilase Location: 1 241 037-1 241 1 27 bp Feature: domain Description: nitrilase Location: 1241451-1241796 bp Feature: domain Description: nitrilase Location: 1 241 451 -1 241 796 bp Feature: gene Location: 1241902-1242840 bp Feature: gene Location: 1243013-1243675 bp Ori: CEO08408.1 Gene: rghR Feature: domain Description: HTH_XRE Location: 1243022-1243193 bp Feature: domain Description: HTH_XRE Location: 1 243022-1 2431 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-ribbon_3 (pfam13248), DUF4003 (pfam13170), RVT-UG5, nitrilase (cl11424), HTH_XRE (smart00530)