myRT

myRT report for GCA_001373435.1_spAn4DRAFT_v1

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Seq: CTRP01000004.1 Sporomusa sp. An4 genome assembly spAn4DRAFT_v1, scaffold SPAN4DRAFT_scaffold-7, whole genome shotgun sequence (285913 bp)
Overview 1 RT 1: 135036-145135 bp Neighborhood of RT #1 [135036, 145149] LysR RVT-GII Intron_maturas2 Phage_holin_4_1 GH25_LytC-like RVT-GII Intron_maturas2 PG_binding_1 Spr Feature: gene Location: 135036-135158 bp Feature: gene Location: 135512-136378 bp Ori: CQR71391.1 Feature: domain Description: LysR Location: 135515-136370 bp Feature: domain Description: LysR Location: 1 3551 5-1 36370 bp Feature: gene Location: 136589-137548 bp Ori: CQR71392.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136640-136841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36640-1 36841 bp Feature: domain Description: Intron_maturas2 Location: 136925-137216 bp Feature: domain Description: Intron_maturas2 Location: 1 36925-1 3721 6 bp Feature: gene Location: 139346-139861 bp Ori: CQR71393.1 Feature: domain Description: Phage_holin_4_1 Location: 139583-139823 bp Feature: domain Description: Phage_holin_4_1 Location: 1 39583-1 39823 bp Feature: gene Location: 139858-140424 bp Ori: CQR71394.1 Feature: domain Description: GH25_LytC-like Location: 139864-140392 bp Feature: domain Description: GH25_LytC-like Location: 1 39864-1 40392 bp Feature: gene Location: 140440-140580 bp Feature: gene Location: 140636-141253 bp Feature: gene Location: 141531-143078 bp Ori: CQR71397.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141579-142371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 579-1 42371 bp Feature: domain Description: Intron_maturas2 Location: 142455-142746 bp Feature: domain Description: Intron_maturas2 Location: 1 42455-1 42746 bp Feature: gene Location: 143671-143898 bp Feature: gene Location: 144442-145149 bp Ori: CQR71399.1 Feature: domain Description: PG_binding_1 Location: 144568-144730 bp Feature: domain Description: PG_binding_1 Location: 1 44568-1 44730 bp Feature: domain Description: Spr Location: 144793-145135 bp Feature: domain Description: Spr Location: 1 44793-1 451 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-GII, Intron_maturas2 (pfam01348), Phage_holin_4_1 (pfam05105), GH25_LytC-like (cd06414), PG_binding_1 (pfam01471), Spr (COG0791)

Seq: CTRP01000008.1 Sporomusa sp. An4 genome assembly spAn4DRAFT_v1, scaffold SPAN4DRAFT_scaffold-11, whole genome shotgun sequence (114425 bp)
Overview 1 RT 1: 12734-17987 bp Neighborhood of RT #1 [12734, 17987] KOG0430 CoxL MoeA_like RVT-GII Intron_maturas2 Feature: gene Location: 12734-15463 bp Ori: CQR72037.1 Feature: domain Description: KOG0430 Location: 12755-13211 bp Feature: domain Description: KOG0430 Location: 12 755-132 11 bp Feature: domain Description: CoxL Location: 13271-15455 bp Feature: domain Description: CoxL Location: 132 71-15455 bp Feature: gene Location: 15568-16593 bp Ori: CQR72038.1 Feature: domain Description: MoeA_like Location: 15601-16537 bp Feature: domain Description: MoeA_like Location: 15601-16537 bp Feature: gene Location: 16993-17352 bp Ori: CQR72039.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17041-17287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17041-172 87 bp Feature: gene Location: 17524-17856 bp Ori: CQR72040.1 Feature: domain Description: Intron_maturas2 Location: 17542-17773 bp Feature: domain Description: Intron_maturas2 Location: 17542 -17773 bp Feature: gene Location: 17850-17987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0430 (KOG0430, Xanthine dehydrogenase ), CoxL (COG1529), MoeA_like (cd03522), RVT-GII, Intron_maturas2 (pfam01348)

Seq: CTRP01000003.1 Sporomusa sp. An4 genome assembly spAn4DRAFT_v1, scaffold SPAN4DRAFT_scaffold-2, whole genome shotgun sequence (1055403 bp)
Overview 1 RT 1: 293746-304898 bp Neighborhood of RT #1 [293746, 305587] ParE_toxin RVT-GII GIIM rmlC rmlA GalU YdcF-like RVT-GII GIIM PHA02517 PHA02517 RVT-GII GIIM PRK06526 COG4584 COG4584 Feature: gene Location: 293746-294069 bp Ori: CQR70501.1 Feature: domain Description: ParE_toxin Location: 293758-294031 bp Feature: domain Description: ParE_toxin Location: 293 758-29403 1 bp Feature: gene Location: 294083-294271 bp Feature: gene Location: 294387-295715 bp Ori: CQR70503.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294642-295335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294642-2953 3 5 bp Feature: domain Description: GIIM Note: maturase Location: 295419-295623 bp Feature: domain Description: GIIM Note: maturase Location: 295419-295623 bp Feature: gene Location: 296228-296785 bp Ori: CQR70504.1 Feature: domain Description: rmlC Location: 296234-296750 bp Feature: domain Description: rmlC Location: 29623 4-296750 bp Feature: gene Location: 296806-296934 bp Ori: CQR70505.1 Feature: domain Description: rmlA Location: 296809-296923 bp Feature: domain Description: rmlA Location: 296809-296923 bp Feature: gene Location: 298217-299176 bp Ori: CQR70508.1 Feature: domain Description: GalU Location: 298241-299084 bp Feature: domain Description: GalU Location: 298241-299084 bp Feature: gene Location: 299598-300350 bp Ori: CQR70509.1 Feature: domain Description: YdcF-like Location: 299829-300327 bp Feature: domain Description: YdcF-like Location: 299829-3 003 27 bp Feature: gene Location: 300449-301003 bp Ori: CQR70510.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300452-300662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 00452-3 00662 bp Feature: domain Description: GIIM Note: maturase Location: 300746-300950 bp Feature: domain Description: GIIM Note: maturase Location: 3 00746-3 00950 bp Feature: gene Location: 301216-301455 bp Ori: CQR70511.1 Feature: domain Description: PHA02517 Location: 301219-301429 bp Feature: domain Description: PHA02517 Location: 3 01219-3 01429 bp Feature: gene Location: 301601-301819 bp Ori: CQR70512.1 Feature: domain Description: PHA02517 Location: 301604-301802 bp Feature: domain Description: PHA02517 Location: 3 01604-3 01802 bp Feature: gene Location: 301986-302102 bp Feature: gene Location: 302099-302809 bp Feature: gene Location: 302760-303191 bp Ori: CQR70515.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302787-302859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 02787-3 02859 bp Feature: domain Description: GIIM Note: maturase Location: 302946-303138 bp Feature: domain Description: GIIM Note: maturase Location: 3 02946-3 03 13 8 bp Feature: gene Location: 303231-303998 bp Ori: CQR70516.1 Feature: domain Description: PRK06526 Location: 303285-303975 bp Feature: domain Description: PRK06526 Location: 3 03 285-3 03 975 bp Feature: gene Location: 303995-305587 bp Ori: CQR70517.1 Feature: domain Description: COG4584 Location: 304034-304139 bp Feature: domain Description: COG4584 Location: 3 0403 4-3 0413 9 bp Feature: domain Description: COG4584 Location: 304415-304898 bp Feature: domain Description: COG4584 Location: 3 04415-3 04898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), RVT-GII, GIIM (pfam08388), rmlC (TIGR01221), rmlA (TIGR01207), GalU (COG1210), YdcF-like (cl00630), PHA02517 (putative transposase OrfB; Reviewed), PRK06526 (transposase; Provisional), COG4584 (Transposase )