myRT

myRT report for GCA_001399595.1_ASM139959v1

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Seq: LKTX01000090.1 Variovorax paradoxus strain H095 H095_contig000090, whole genome shotgun sequence (35075 bp)
Overview 1 RT 1: 17550-24303 bp Neighborhood of RT #1 [17550, 24323] LysR PBP2_Bug_TTT RVT-GII GIIM COG2936 COG3246 Feature: gene Location: 17550-18515 bp Feature: domain Description: LysR Location: 17553-18402 bp Feature: domain Description: LysR Location: 1 7553-1 8402 bp Feature: gene Location: 18624-19592 bp Feature: domain Description: PBP2_Bug_TTT Location: 18705-19572 bp Feature: domain Description: PBP2_Bug_TTT Location: 1 8705-1 9572 bp Feature: gene Location: 20020-21396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20359-20971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20359-20971 bp Feature: domain Description: GIIM Note: maturase Location: 21034-21238 bp Feature: domain Description: GIIM Note: maturase Location: 21 034-21 238 bp Feature: gene Location: 21611-23368 bp Feature: domain Description: COG2936 Location: 21662-23357 bp Feature: domain Description: COG2936 Location: 21 662-23357 bp Feature: gene Location: 23394-24323 bp Feature: domain Description: COG3246 Location: 23403-24303 bp Feature: domain Description: COG3246 Location: 23403-24303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PBP2_Bug_TTT (cd07012), RVT-GII, GIIM (pfam08388), COG2936 (Predicted acyl esterase ), COG3246 (Uncharacterized conserved protein, DUF849 family )

Seq: LKTX01000330.1 Variovorax paradoxus strain H095 H095_contig000330, whole genome shotgun sequence (1519 bp)
Overview 1 RT 1: 1-1189 bp Neighborhood of RT #1 [1, 1515] RVT-Retrons Feature: gene Location: 1-1515 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 571-1189 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 571-1189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons