myRT

myRT report for GCA_001400675.1_PaeICMP8947

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Seq: LJPN01000163.1 Pseudomonas amygdali pv. aesculi strain ICMP8947 PaeICMP8947_Contig_40, whole genome shotgun sequence (18135 bp)
Overview 1 RT 1: 8708-14143 bp Neighborhood of RT #1 [8708, 16980] PRK09692 RVT-Retrons SIR2-like Feature: gene Location: 8708-9877 bp Ori: KPW22510.1 Feature: domain Description: PRK09692 Location: 8714-9857 bp Feature: domain Description: PRK09692 Location: 871 4-9857 bp Feature: gene Location: 9874-10716 bp Feature: gene Location: 11329-13164 bp Ori: KPW22508.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11464-12172 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 464-1 21 72 bp Feature: gene Location: 13384-16980 bp Ori: KPW22515.1 Feature: domain Description: SIR2-like Location: 13486-14143 bp Feature: domain Description: SIR2-like Location: 1 3486-1 41 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, SIR2-like (cd01406)

Seq: LJPN01000624.1 Pseudomonas amygdali pv. aesculi strain ICMP8947 PaeICMP8947_Contig_64, whole genome shotgun sequence (22496 bp)
Overview 1 RT 1: 5878-11902 bp Neighborhood of RT #1 [5878, 11902] GST_N_GTT2_like GST_C_GTT2_like AcrR RVT-UG9 PRK14975 Feature: gene Location: 5878-6588 bp Ori: KPW06793.1 Feature: domain Description: GST_N_GTT2_like Location: 5926-6151 bp Feature: domain Description: GST_N_GTT2 _like Location: 592 6-6151 bp Feature: domain Description: GST_C_GTT2_like Location: 6187-6535 bp Feature: domain Description: GST_C_GTT2 _like Location: 6187-6535 bp Feature: gene Location: 6725-7303 bp Ori: KPW06796.1 Feature: domain Description: AcrR Location: 6740-7214 bp Feature: domain Description: AcrR Location: 6740-72 14 bp Feature: gene Location: 8100-9917 bp Ori: KPW06797.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 8487-9123 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 8487-912 3 bp Feature: gene Location: 9910-11463 bp Ori: KPW06798.1 Feature: domain Description: PRK14975 Location: 10642-11395 bp Feature: domain Description: PRK14975 Location: 10642 -11395 bp Feature: gene Location: 11630-11902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GST_N_GTT2_like (cd03051), GST_C_GTT2_like (cd03182), AcrR (COG1309), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional)