myRT

myRT report for GCA_001401175.1_PviICMP3963

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Seq: LJRR01000219.1 Pseudomonas syringae pv. viburni strain ICMP3963 PviICMP3963_Contig_263, whole genome shotgun sequence (21133 bp)
Overview 1 RT 1: 16480-20043 bp Neighborhood of RT #1 [16480, 20216] fliR_like_III FlhB_rel_III RVT-GII GIIM Feature: gene Location: 16480-17274 bp Ori: KPZ15717.1 Feature: domain Description: fliR_like_III Location: 16498-17248 bp Feature: domain Description: fliR_like_III Location: 1 6498-1 7248 bp Feature: gene Location: 17271-18350 bp Ori: KPZ15721.1 Feature: domain Description: FlhB_rel_III Location: 17277-18306 bp Feature: domain Description: FlhB_rel_III Location: 1 7277-1 8306 bp Feature: gene Location: 18933-20216 bp Ori: KPZ15714.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19173-19788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 73-1 9788 bp Feature: domain Description: GIIM Note: maturase Location: 19833-20043 bp Feature: domain Description: GIIM Note: maturase Location: 1 9833-20043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fliR_like_III (TIGR01401), FlhB_rel_III (TIGR01404), RVT-GII, GIIM (pfam08388)

Seq: LJRR01000350.1 Pseudomonas syringae pv. viburni strain ICMP3963 PviICMP3963_Contig_169, whole genome shotgun sequence (28789 bp)
Overview 1 RT 1: 21604-27545 bp Neighborhood of RT #1 [21604, 27545] ALDH_F6_MMSDH LysR RVT-G2L4 Feature: gene Location: 21604-23130 bp Ori: KPZ11631.1 Feature: domain Description: ALDH_F6_MMSDH Location: 21649-23077 bp Feature: domain Description: ALDH_F6_MMSDH Location: 2 1649-2 3077 bp Feature: gene Location: 23015-24232 bp Ori: KPZ11633.1 Feature: domain Description: LysR Location: 23324-24176 bp Feature: domain Description: LysR Location: 2 332 4-2 4176 bp Feature: gene Location: 25152-26405 bp Ori: KPZ11613.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 25371-25956 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 5371-2 5956 bp Feature: gene Location: 27438-27545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_F6_MMSDH (cd07085), LysR (COG0583), RVT-G2L4