myRT

myRT report for GCA_001401255.1_PthICMP3923

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Seq: LJRU01000260.1 Pseudomonas syringae pv. theae strain ICMP3923 PthICMP3923_Contig_165, whole genome shotgun sequence (3569 bp)
Overview 1 RT 1: 63-3464 bp Neighborhood of RT #1 [63, 3469] RVT-UG17 PRK13981 nadE Feature: gene Location: 63-947 bp Ori: KPZ30965.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 87-414 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 87-41 4 bp Feature: gene Location: 1118-2770 bp Ori: KPZ30964.1 Feature: domain Description: PRK13981 Location: 1133-2759 bp Feature: domain Description: PRK1 3981 Location: 1 1 33-2759 bp Feature: gene Location: 3164-3469 bp Ori: KPZ30966.1 Feature: domain Description: nadE Location: 3167-3464 bp Feature: domain Description: nadE Location: 31 67-3464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, PRK13981 (NAD synthetase; Provisional), nadE (TIGR00552)

Seq: LJRU01000191.1 Pseudomonas syringae pv. theae strain ICMP3923 PthICMP3923_Contig_38, whole genome shotgun sequence (14025 bp)
Overview 1 RT 1: 115-3028 bp Neighborhood of RT #1 [115, 3028] RVT-GII GIIM Feature: gene Location: 115-1383 bp Ori: KPZ32365.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-976 bp Feature: domain Description: GIIM Note: maturase Location: 1054-1276 bp Feature: domain Description: GIIM Note: maturase Location: 1054-12 76 bp Feature: gene Location: 2568-2807 bp Feature: gene Location: 2843-3028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LJRU01000152.1 Pseudomonas syringae pv. theae strain ICMP3923 PthICMP3923_Contig_95, whole genome shotgun sequence (1837 bp)
Overview 1 RT 1: 90-1323 bp Neighborhood of RT #1 [90, 1457] RVT-GII GIIM Feature: gene Location: 90-1457 bp Ori: KPZ33314.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423 -103 8 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1323 bp Feature: domain Description: GIIM Note: maturase Location: 1095-13 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)