myRT

myRT report for GCA_001401535.2_ASM140153v2

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Seq: JPYI02000037.1 Xanthomonas phaseoli pv. dieffenbachiae strain LMG 25940 Contig37, whole genome shotgun sequence (51749 bp)
Overview 1 RT 1: 1692-6157 bp Neighborhood of RT #1 [1692, 6984] RVT-UG11 TraD TraA_Ti Feature: gene Location: 1692-2318 bp Feature: gene Location: 2311-3723 bp Feature: gene Location: 4017-4772 bp Ori: OQP80663.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4140-4581 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 41 40-4581 bp Feature: gene Location: 4793-5122 bp Ori: OQP80632.1 Feature: domain Description: TraD Location: 4913-5042 bp Feature: domain Description: TraD Location: 491 3-5042 bp Feature: gene Location: 5389-6984 bp Ori: OQP80633.1 Feature: domain Description: TraA_Ti Location: 5392-6157 bp Feature: domain Description: TraA_Ti Location: 5392-61 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, TraD (pfam06412), TraA_Ti (TIGR02768)

Seq: JPYI02000098.1 Xanthomonas phaseoli pv. dieffenbachiae strain LMG 25940 Contig92, whole genome shotgun sequence (73662 bp)
Overview 1 RT 1: 70746-73069 bp Neighborhood of RT #1 [70746, 73362] HTH_XRE AAA_21 AAA_21 RVT-Retrons Feature: gene Location: 70746-71033 bp Ori: OQP74880.1 Feature: domain Description: HTH_XRE Location: 70752-70899 bp Feature: domain Description: HTH_XRE Location: 70752 -70899 bp Feature: gene Location: 71069-72409 bp Ori: OQP74881.1 Feature: domain Description: AAA_21 Location: 71153-71531 bp Feature: domain Description: AAA_2 1 Location: 71153-71531 bp Feature: domain Description: AAA_21 Location: 71576-71816 bp Feature: domain Description: AAA_2 1 Location: 71576-71816 bp Feature: gene Location: 72406-73362 bp Ori: OQP74882.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72520-73069 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 52 0-73069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), AAA_21 (pfam13304), RVT-Retrons