myRT

myRT report for GCA_001402165.1_ASM140216v1

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Seq: LCUE01000017.1 Vibrio metoecus strain 07-2435 contig00017, whole genome shotgun sequence (37188 bp)
Overview 1 RT 1: 20129-24789 bp Neighborhood of RT #1 [20129, 24789] Acetyltransf_10 RVT-UG2 RimL Feature: gene Location: 20129-20542 bp Ori: KQA16682.1 Feature: domain Description: Acetyltransf_10 Location: 20231-20504 bp Feature: domain Description: Acetyltransf_1 0 Location: 20231 -20504 bp Feature: gene Location: 20702-21160 bp Feature: gene Location: 21934-23217 bp Ori: KQA16684.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 22135-22918 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 221 35-2291 8 bp Feature: gene Location: 23675-24208 bp Ori: KQA16685.1 Feature: domain Description: RimL Location: 23705-24203 bp Feature: domain Description: RimL Location: 23705-24203 bp Feature: gene Location: 24364-24789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), RVT-UG2, RimL (COG1670)

Seq: LCUE01000004.1 Vibrio metoecus strain 07-2435 contig00004, whole genome shotgun sequence (289769 bp)
Overview 1 RT 1: 9959-19257 bp Neighborhood of RT #1 [9959, 19478] DUF5051 Cas2_I_II_III RVT-CRISPR Cas_Cas1 TIGR03986 RAMPs RAMPs RAMPs Feature: gene Location: 9959-10510 bp Ori: KQA18594.1 Feature: domain Description: DUF5051 Location: 9962-10490 bp Feature: domain Description: DUF5051 Location: 9962 -10490 bp Feature: gene Location: 12497-12775 bp Ori: KQA18595.1 Feature: domain Description: Cas2_I_II_III Location: 12509-12704 bp Feature: domain Description: Cas2 _I_II_III Location: 12 509-12 704 bp Feature: gene Location: 12779-15595 bp Ori: KQA18596.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13868-14477 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13868-14477 bp Feature: domain Description: Cas_Cas1 Location: 14654-15470 bp Feature: domain Description: Cas_Cas1 Location: 14654-15470 bp Feature: gene Location: 15628-17979 bp Ori: KQA18597.1 Feature: domain Description: TIGR03986 Location: 15649-17605 bp Feature: domain Description: TIGR03986 Location: 15649-17605 bp Feature: gene Location: 17979-19478 bp Ori: KQA18598.1 Feature: domain Description: RAMPs Location: 18021-18183 bp Feature: domain Description: RAMPs Location: 1802 1-18183 bp Feature: domain Description: RAMPs Location: 18321-18498 bp Feature: domain Description: RAMPs Location: 1832 1-18498 bp Feature: domain Description: RAMPs Location: 18720-19257 bp Feature: domain Description: RAMPs Location: 1872 0-192 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5051 (pfam16473), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas_Cas1 (pfam01867), TIGR03986 (CRISPR-associated protein), RAMPs (pfam03787)