myRT

myRT report for GCA_001402275.1_ASM140227v1

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Seq: LBGC01000015.1 Vibrio cholerae strain YB3G04 YB03_G04_contig_15_consensus, whole genome shotgun sequence (126390 bp)
Overview 1 RT 1: 53568-58335 bp Neighborhood of RT #1 [53568, 58335] guaA Arm-DNA-bind_3 INT_P4_C RVT-Retrons HTH_XRE Feature: gene Location: 53568-55121 bp Ori: KQA55025.1 Gene: guaA Feature: domain Description: guaA Location: 53586-55119 bp Feature: domain Description: guaA Location: 53586-551 1 9 bp Feature: gene Location: 55429-56616 bp Ori: KQA55026.1 Feature: domain Description: Arm-DNA-bind_3 Location: 55435-55693 bp Feature: domain Description: Arm-DNA-bind_3 Location: 55435-55693 bp Feature: domain Description: INT_P4_C Location: 56044-56599 bp Feature: domain Description: INT_P4_C Location: 56044-56599 bp Feature: gene Location: 56643-57782 bp Ori: KQA55027.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56781-57333 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56781 -57333 bp Feature: gene Location: 57766-58053 bp Ori: KQA55028.1 Feature: domain Description: HTH_XRE Location: 57781-57946 bp Feature: domain Description: HTH_XRE Location: 57781 -57946 bp Feature: gene Location: 58117-58335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT guaA (PRK00074), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, HTH_XRE (smart00530)