myRT

myRT report for GCA_001403835.1_6731_2_22

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Seq: CGWS01000006.1 Streptococcus pneumoniae genome assembly 6731_2#22, scaffold ERS020540SCcontig000006, whole genome shotgun sequence (78400 bp)
Overview 1 RT 1: 24448-34617 bp Neighborhood of RT #1 [24448, 34617] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 24448-24747 bp Feature: gene Location: 24818-26161 bp Feature: domain Description: KOG1000 Location: 25097-25412 bp Feature: domain Description: KOG1 000 Location: 25097-2541 2 bp Feature: gene Location: 26299-28077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26560-27352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26560-27352 bp Feature: domain Description: Intron_maturas2 Location: 27457-27688 bp Feature: domain Description: Intron_maturas2 Location: 27457-27688 bp Feature: domain Description: HNHc Note: nucleases Location: 27853-28039 bp Feature: domain Description: HNHc Note: nucleases Location: 27853-28039 bp Feature: gene Location: 28575-34016 bp Feature: domain Description: N6_Mtase Location: 30567-31158 bp Feature: domain Description: N6_Mtase Location: 30567-31 1 58 bp Feature: domain Description: COG4646 Location: 31749-33873 bp Feature: domain Description: COG4646 Location: 31 749-33873 bp Feature: gene Location: 34066-34617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )