myRT

myRT report for GCA_001404295.1_L.albaCECT5094_Spades_Prokka

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Seq: CXWA01000022.1 Labrenzia alba genome assembly L.albaCECT5094_Spades_Prokka, contig 0022, whole genome shotgun sequence (21029 bp)
Overview 1 RT 1: 15839-19819 bp Neighborhood of RT #1 [15839, 19983] Arm-DNA-bind_3 RVT-GII HTH_32 Feature: gene Location: 15839-16645 bp Ori: CTQ63503.1 Gene: intS Feature: domain Description: Arm-DNA-bind_3 Location: 16070-16328 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 6070-1 6328 bp Feature: gene Location: 16880-17263 bp Feature: gene Location: 17582-18889 bp Ori: CTQ63505.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17882-18602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7882-1 8602 bp Feature: gene Location: 19072-19248 bp Feature: gene Location: 19492-19983 bp Ori: CTQ63507.1 Feature: domain Description: HTH_32 Location: 19597-19819 bp Feature: domain Description: HTH_32 Location: 1 9597-1 981 9 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CXWA01000004.1 Labrenzia alba genome assembly L.albaCECT5094_Spades_Prokka, contig 0004, whole genome shotgun sequence (622663 bp)
Overview 1 RT 1: 480703-487972 bp Neighborhood of RT #1 [480703, 488031] PRK05298 SLATT_5 RVT-UG13 VOC_like MFS_MefA_like Feature: gene Location: 480703-483849 bp Ori: CTQ60004.1 Gene: uvrB Feature: domain Description: PRK05298 Location: 481519-483487 bp Feature: domain Description: PRK052 98 Location: 481519-483487 bp Feature: gene Location: 483856-484446 bp Ori: CTQ60005.1 Feature: domain Description: SLATT_5 Location: 483871-484423 bp Feature: domain Description: SLATT_5 Location: 483871-48442 3 bp Feature: gene Location: 484446-485876 bp Ori: CTQ60006.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 484872-485364 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 484872 -485364 bp Feature: gene Location: 486419-486793 bp Ori: CTQ60007.1 Feature: domain Description: VOC_like Location: 486449-486782 bp Feature: domain Description: VOC_like Location: 486449-486782 bp Feature: gene Location: 486820-488031 bp Ori: CTQ60008.1 Feature: domain Description: MFS_MefA_like Location: 486865-487972 bp Feature: domain Description: MFS_MefA_like Location: 486865-487972 bp Sorry, your browser does not support inline SVG.
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