myRT

myRT report for GCA_001404595.1_13414_6_16

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Seq: CYYN01000030.1 Coprococcus comes strain 2789STDY5608832 genome assembly, contig: SCcontig000030, whole genome shotgun sequence (18910 bp)
Overview 1 RT 1: 1474-7420 bp Neighborhood of RT #1 [1474, 7518] int INT_ICEBs1_C_like HTH_TipAL-Mta TipAS RVT-GII HTH_XRE RepA_N Feature: gene Location: 1474-2769 bp Feature: domain Description: int Location: 1495-2041 bp Feature: domain Description: int Location: 1 495-2041 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2068-2707 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 2068-2707 bp Feature: gene Location: 3005-3739 bp Feature: domain Description: HTH_TipAL-Mta Location: 3011-3299 bp Feature: domain Description: HTH_TipAL-Mta Location: 301 1 -3299 bp Feature: domain Description: TipAS Location: 3377-3722 bp Feature: domain Description: TipAS Location: 3377-3722 bp Feature: gene Location: 4230-5525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4485-5175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4485-51 75 bp Feature: gene Location: 5701-6507 bp Feature: domain Description: HTH_XRE Location: 5728-5899 bp Feature: domain Description: HTH_XRE Location: 5728-5899 bp Feature: gene Location: 7177-7518 bp Feature: domain Description: RepA_N Location: 7258-7420 bp Feature: domain Description: RepA_N Location: 7258-7420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), INT_ICEBs1_C_like (cd01189), HTH_TipAL-Mta (cd01106), TipAS (pfam07739), RVT-GII, HTH_XRE (smart00530), RepA_N (pfam06970)