myRT

myRT report for GCA_001404755.1_13470_2_82

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Seq: CYZN01000009.1 Blautia wexlerae strain 2789STDY5834863 genome assembly, contig: SCcontig000009, whole genome shotgun sequence (146158 bp)
Overview 1 RT 1: 91570-96658 bp Neighborhood of RT #1 [91570, 96658] XRE HipB COG2932 RVT_N RVT-GII GIIM LexA_DNA_bind Feature: gene Location: 91570-91770 bp Feature: domain Description: XRE Location: 91582-91765 bp Feature: domain Description: XRE Location: 91 582-91 765 bp Feature: gene Location: 91827-92558 bp Feature: domain Description: HipB Location: 91839-92055 bp Feature: domain Description: HipB Location: 91 839-92055 bp Feature: domain Description: COG2932 Location: 92211-92523 bp Feature: domain Description: COG2932 Location: 9221 1 -92523 bp Feature: gene Location: 93385-94854 bp Feature: RT Description: RVT_N Location: 93430-93667 bp Feature: RT Description: RVT_N Location: 93430-93667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93718-94366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9371 8-94366 bp Feature: domain Description: GIIM Note: maturase Location: 94417-94651 bp Feature: domain Description: GIIM Note: maturase Location: 9441 7-94651 bp Feature: gene Location: 96194-96406 bp Feature: domain Description: LexA_DNA_bind Location: 96203-96392 bp Feature: domain Description: LexA_DNA_bind Location: 96203-96392 bp Feature: gene Location: 96419-96658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), HipB (COG1396), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LexA_DNA_bind (pfam01726)

Seq: CYZN01000008.1 Blautia wexlerae strain 2789STDY5834863 genome assembly, contig: SCcontig000008, whole genome shotgun sequence (157773 bp)
Overview 1 RT 1: 59435-64599 bp Neighborhood of RT #1 [59435, 64599] RVT-DGRs Feature: gene Location: 59435-60157 bp Feature: gene Location: 60158-62440 bp Feature: gene Location: 62845-64122 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63136-63868 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63136-63868 bp Feature: gene Location: 64064-64408 bp Feature: gene Location: 64408-64599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CYZN01000005.1 Blautia wexlerae strain 2789STDY5834863 genome assembly, contig: SCcontig000005, whole genome shotgun sequence (207192 bp)
Overview 1 RT 1: 120426-126559 bp Neighborhood of RT #1 [120426, 126567] PRK08323 COG4603 RVT-GII GIIM GH20_GcnA-like Glyco_H_20C_C NagC Feature: gene Location: 120426-120818 bp Feature: domain Description: PRK08323 Location: 120477-120813 bp Feature: domain Description: PRK083 23 Location: 120477-120813 bp Feature: gene Location: 120845-121051 bp Feature: domain Description: COG4603 Location: 120851-120995 bp Feature: domain Description: COG4603 Location: 120851-120995 bp Feature: gene Location: 121206-122495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121497-122130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121497-12213 0 bp Feature: domain Description: GIIM Note: maturase Location: 122211-122427 bp Feature: domain Description: GIIM Note: maturase Location: 122211-122427 bp Feature: gene Location: 123492-125405 bp Feature: domain Description: GH20_GcnA-like Location: 123801-124713 bp Feature: domain Description: GH20_GcnA-like Location: 123 801-124713 bp Feature: domain Description: Glyco_H_20C_C Location: 124788-125340 bp Feature: domain Description: Glyco_H_20C_C Location: 124788-1253 40 bp Feature: gene Location: 125689-126567 bp Feature: domain Description: NagC Location: 125695-126559 bp Feature: domain Description: NagC Location: 125695-126559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08323 (phenylhydantoinase; Validated), COG4603 (ABC-type uncharacterized transport system, permease component ), RVT-GII, GIIM (pfam08388), GH20_GcnA-like (cd06565), Glyco_H_20C_C (pfam18088), NagC (COG1940)

Seq: CYZN01000043.1 Blautia wexlerae strain 2789STDY5834863 genome assembly, contig: SCcontig000043, whole genome shotgun sequence (18235 bp)
Overview 1 RT 1: 14948-18169 bp Neighborhood of RT #1 [14948, 18198] Integrase_DNA INT_ICEBs1_C_like TnpV RVT-GII Feature: gene Location: 14948-16147 bp Feature: domain Description: Integrase_DNA Location: 14951-15161 bp Feature: domain Description: Integrase_DNA Location: 14 951-15161 bp Feature: domain Description: INT_ICEBs1_C_like Location: 15542-16097 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1554 2-16097 bp Feature: gene Location: 16514-16897 bp Feature: domain Description: TnpV Location: 16565-16889 bp Feature: domain Description: TnpV Location: 16565-16889 bp Feature: gene Location: 17413-18198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17668-18169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17668-18169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_DNA (pfam02920), INT_ICEBs1_C_like (cd01189), TnpV (pfam14198), RVT-GII

Seq: CYZN01000034.1 Blautia wexlerae strain 2789STDY5834863 genome assembly, contig: SCcontig000034, whole genome shotgun sequence (36011 bp)
Overview 1 RT 1: 38-3521 bp Neighborhood of RT #1 [38, 3934] RVT-GII DDE_Tnp_1 Macro_Appr_pase_like Feature: gene Location: 38-823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-794 bp Feature: gene Location: 1527-2807 bp Feature: domain Description: DDE_Tnp_1 Location: 1869-2529 bp Feature: domain Description: DDE_Tnp_1 Location: 1869-25 29 bp Feature: gene Location: 3032-3934 bp Feature: domain Description: Macro_Appr_pase_like Location: 3041-3521 bp Feature: domain Description: Macro_Appr_pase_like Location: 3041-35 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), Macro_Appr_pase_like, RVT-GII

Seq: CYZN01000040.1 Blautia wexlerae strain 2789STDY5834863 genome assembly, contig: SCcontig000040, whole genome shotgun sequence (23865 bp)
Overview 1 RT 1: 12945-19834 bp Neighborhood of RT #1 [12945, 19869] HipB INT_ICEBs1_C_like RVT-GII PRK06836 FGGY_SHK_like Feature: gene Location: 12945-13574 bp Feature: domain Description: HipB Location: 12975-13302 bp Feature: domain Description: HipB Location: 12975-13302 bp Feature: gene Location: 13661-14956 bp Feature: domain Description: INT_ICEBs1_C_like Location: 14255-14894 bp Feature: domain Description: INT_ICEBs1_C_like Location: 14255-14894 bp Feature: gene Location: 15574-16869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15829-16519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15829-16 519 bp Feature: gene Location: 17333-18520 bp Feature: domain Description: PRK06836 Location: 17336-18512 bp Feature: domain Description: PRK06 836 Location: 17336 -18512 bp Feature: gene Location: 18517-19869 bp Feature: domain Description: FGGY_SHK_like Location: 18529-19834 bp Feature: domain Description: FGGY_SHK_like Location: 18529-19834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), INT_ICEBs1_C_like (cd01189), RVT-GII, PRK06836 (pyridoxal phosphate-dependent aminotransferase), FGGY_SHK_like (cd07777)