myRT

myRT report for GCA_001405055.1_13414_6_23

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Seq: CYZS01000008.1 Bacteroides xylanisolvens strain 2789STDY5608839 genome assembly, contig: SCcontig000008, whole genome shotgun sequence (211482 bp)
Overview 1 RT 1: 47812-56401 bp Neighborhood of RT #1 [47812, 56403] Abhydrolase_7 RVT-GII GIIM Mfa_like_1 NanU Feature: gene Location: 47812-47949 bp Feature: gene Location: 48274-49518 bp Feature: domain Description: Abhydrolase_7 Location: 48355-49507 bp Feature: domain Description: Abhydrolase_7 Location: 48355-49507 bp Feature: gene Location: 49693-50985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49903-50560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49903-50560 bp Feature: domain Description: GIIM Note: maturase Location: 50638-50845 bp Feature: domain Description: GIIM Note: maturase Location: 50638-50845 bp Feature: gene Location: 52762-54804 bp Feature: domain Description: Mfa_like_1 Location: 52921-53635 bp Feature: domain Description: Mfa_like_1 Location: 52921 -53635 bp Feature: gene Location: 54853-56403 bp Feature: domain Description: NanU Location: 54856-56401 bp Feature: domain Description: NanU Location: 54856-56401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Abhydrolase_7 (pfam12715), RVT-GII, GIIM (pfam08388), Mfa_like_1 (pfam13149), NanU (NF033072)

Seq: CYZS01000007.1 Bacteroides xylanisolvens strain 2789STDY5608839 genome assembly, contig: SCcontig000007, whole genome shotgun sequence (223435 bp)
Overview 1 RT 1: 106940-112268 bp Neighborhood of RT #1 [106940, 112273] RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3875 Feature: gene Location: 106940-107215 bp Feature: gene Location: 107216-107347 bp Feature: gene Location: 107972-109618 bp Feature: RT Description: RVT_N Location: 108026-108269 bp Feature: RT Description: RVT_N Location: 10802 6-1082 69 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108314-108959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108314-108959 bp Feature: domain Description: GIIM Note: maturase Location: 109013-109244 bp Feature: domain Description: GIIM Note: maturase Location: 109013-1092 44 bp Feature: gene Location: 110189-112087 bp Feature: domain Description: Bac_Flav_CT_G Location: 110192-112031 bp Feature: domain Description: Bac_Flav_CT_G Location: 110192 -112 031 bp Feature: gene Location: 112103-112273 bp Feature: domain Description: DUF3875 Location: 112115-112268 bp Feature: domain Description: DUF3875 Location: 112 115-112 2 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Bac_Flav_CT_G (TIGR03783), DUF3875 (pfam12991)

Seq: CYZS01000017.1 Bacteroides xylanisolvens strain 2789STDY5608839 genome assembly, contig: SCcontig000017, whole genome shotgun sequence (109107 bp)
Overview 1 RT 1: 42428-51858 bp Neighborhood of RT #1 [42428, 51858] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 42428-49147 bp Feature: domain Description: Laminin_G_3 Location: 43871-43949 bp Feature: domain Description: Laminin_G_3 Location: 43 871-43 949 bp Feature: domain Description: Laminin_G_3 Location: 44600-45026 bp Feature: domain Description: Laminin_G_3 Location: 44600-45026 bp Feature: gene Location: 49144-49338 bp Feature: gene Location: 49651-50955 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49864-50539 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49864-5053 9 bp Feature: gene Location: 50952-51437 bp Feature: gene Location: 51616-51858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: CYZS01000042.1 Bacteroides xylanisolvens strain 2789STDY5608839 genome assembly, contig: SCcontig000042, whole genome shotgun sequence (42361 bp)
Overview 1 RT 1: 3109-15516 bp Neighborhood of RT #1 [3109, 15647] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 3109-3945 bp Feature: domain Description: PDDEXK_2 Location: 3130-3808 bp Feature: domain Description: PDDEXK_2 Location: 3130-3808 bp Feature: gene Location: 4114-6321 bp Feature: gene Location: 6529-7659 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6850-7393 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6850-7393 bp Feature: gene Location: 7710-13751 bp Feature: domain Description: DUF4011 Location: 8940-9453 bp Feature: domain Description: DUF4 011 Location: 894 0-94 53 bp Feature: domain Description: DEXXQc_SF1 Location: 9792-10221 bp Feature: domain Description: DEXXQc_SF1 Location: 9792-10221 bp Feature: domain Description: DEXXQc_SF1 Location: 11223-11979 bp Feature: domain Description: DEXXQc_SF1 Location: 11223-11979 bp Feature: domain Description: TIGR00376 Location: 12108-12498 bp Feature: domain Description: TIGR00376 Location: 12108-124 98 bp Feature: domain Description: MTES_1575 Location: 12651-12936 bp Feature: domain Description: MTES_1575 Location: 12651-12936 bp Feature: domain Description: DUF3320 Location: 13266-13401 bp Feature: domain Description: DUF3320 Location: 13266-134 01 bp Feature: gene Location: 13848-15647 bp Feature: domain Description: rpsA Location: 13917-15516 bp Feature: domain Description: rpsA Location: 13917-15516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784)

Seq: CYZS01000010.1 Bacteroides xylanisolvens strain 2789STDY5608839 genome assembly, contig: SCcontig000010, whole genome shotgun sequence (181471 bp)
Overview 1 RT 1: 124781-128313 bp Neighborhood of RT #1 [124781, 128313] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 124781-125590 bp Feature: domain Description: DUF1566 Location: 125312-125561 bp Feature: domain Description: DUF15 66 Location: 125 312-125 5 61 bp Feature: gene Location: 125737-126144 bp Feature: domain Description: Avd_like Location: 125770-126079 bp Feature: domain Description: Avd_like Location: 125 770-126079 bp Feature: gene Location: 126159-127580 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 126534-127260 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1265 34-127260 bp Feature: gene Location: 127543-127821 bp Feature: gene Location: 128020-128313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: CYZS01000001.1 Bacteroides xylanisolvens strain 2789STDY5608839 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (376433 bp)
Overview 1 RT 1: 47244-50893 bp Neighborhood of RT #1 [47244, 50893] RVT-DGRs Feature: gene Location: 47244-47624 bp Feature: gene Location: 47621-48049 bp Feature: gene Location: 48012-49199 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48342-49041 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48342-49041 bp Feature: gene Location: 49321-49458 bp Feature: gene Location: 49532-50893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs