myRT

myRT report for GCA_001405135.1_13414_6_50

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Seq: CYYY01000002.1 Dorea longicatena strain 2789STDY5608866 genome assembly, contig: SCcontig000002, whole genome shotgun sequence (378707 bp)
Overview 1 RT 1: 146005-159725 bp Neighborhood of RT #1 [146005, 159725] YodL LPD16 DUF4316 LPD25 KOG4768 RVT-GII YtxK COG4646 Feature: gene Location: 146005-148758 bp Feature: domain Description: YodL Location: 146785-147079 bp Feature: domain Description: YodL Location: 1 46785-1 47079 bp Feature: domain Description: LPD16 Location: 147109-147331 bp Feature: domain Description: LPD1 6 Location: 1 471 09-1 47331 bp Feature: domain Description: DUF4316 Location: 147379-147463 bp Feature: domain Description: DUF431 6 Location: 1 47379-1 47463 bp Feature: domain Description: LPD25 Location: 148072-148363 bp Feature: domain Description: LPD25 Location: 1 48072-1 48363 bp Feature: gene Location: 149957-150574 bp Feature: domain Description: KOG4768 Location: 149999-150569 bp Feature: domain Description: KOG4768 Location: 1 49999-1 50569 bp Feature: gene Location: 150571-151323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150835-151270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 50835-1 51 270 bp Feature: gene Location: 151873-158568 bp Feature: domain Description: YtxK Location: 154708-155536 bp Feature: domain Description: YtxK Location: 1 54708-1 55536 bp Feature: domain Description: COG4646 Location: 155599-158164 bp Feature: domain Description: COG4646 Location: 1 55599-1 581 64 bp Feature: gene Location: 158637-159725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class )