myRT

myRT report for GCA_001405215.1_14207_7_44

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Seq: CZBA01000003.1 Blautia obeum strain 2789STDY5834921 genome assembly, contig: SCcontig000003, whole genome shotgun sequence (210856 bp)
Overview 1 RT 1: 134418-139371 bp Neighborhood of RT #1 [134418, 139373] PRTase_2 HTH_MARR RVT-Retrons RVT-Retrons DUF4268 Feature: gene Location: 134418-135527 bp Feature: gene Location: 135622-136812 bp Feature: domain Description: PRTase_2 Location: 136000-136198 bp Feature: domain Description: PRTase_2 Location: 1 36000-1 361 98 bp Feature: domain Description: HTH_MARR Location: 136534-136666 bp Feature: domain Description: HTH_MARR Location: 1 36534-1 36666 bp Feature: gene Location: 136964-137491 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 137276-137486 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 37276-1 37486 bp Feature: gene Location: 137488-138072 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 137491-137833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 37491 -1 37833 bp Feature: gene Location: 138251-138352 bp Feature: gene Location: 138453-139373 bp Feature: domain Description: DUF4268 Location: 138969-139371 bp Feature: domain Description: DUF4268 Location: 1 38969-1 39371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTase_2 (pfam15609), HTH_MARR (smart00347), RVT-Retrons, DUF4268 (pfam14088)

Seq: CZBA01000031.1 Blautia obeum strain 2789STDY5834921 genome assembly, contig: SCcontig000031, whole genome shotgun sequence (28794 bp)
Overview 1 RT 1: 7809-11939 bp Neighborhood of RT #1 [7809, 11950] RVT-DGRs Dam Feature: gene Location: 7809-8732 bp Feature: gene Location: 8784-9401 bp Feature: gene Location: 9707-10891 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9899-10640 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9899-10640 bp Feature: gene Location: 10878-11114 bp Feature: gene Location: 11192-11950 bp Feature: domain Description: Dam Location: 11198-11939 bp Feature: domain Description: Dam Location: 11198-11939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), RVT-DGRs

Seq: CZBA01000010.1 Blautia obeum strain 2789STDY5834921 genome assembly, contig: SCcontig000010, whole genome shotgun sequence (126885 bp)
Overview 1 RT 1: 33022-36549 bp Neighborhood of RT #1 [33022, 36638] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 Feature: gene Location: 33022-34164 bp Feature: domain Description: PHA00653 Location: 33145-34162 bp Feature: domain Description: PHA00653 Location: 3 3 145-3 4162 bp Feature: gene Location: 34205-34561 bp Feature: domain Description: Avd_like Location: 34235-34541 bp Feature: domain Description: Avd_like Location: 3 423 5-3 4541 bp Feature: gene Location: 34888-35949 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35116-35818 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 5116-3 5818 bp Feature: gene Location: 35974-36153 bp Feature: gene Location: 36156-36638 bp Feature: domain Description: Phage_holin_4_1 Location: 36189-36549 bp Feature: domain Description: Phage_holin_4_1 Location: 3 6189-3 6549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: CZBA01000006.1 Blautia obeum strain 2789STDY5834921 genome assembly, contig: SCcontig000006, whole genome shotgun sequence (177581 bp)
Overview 1 RT 1: 21910-25561 bp Neighborhood of RT #1 [21910, 25561] dctM RVT-DGRs Feature: gene Location: 21910-22140 bp Feature: domain Description: dctM Location: 21982-22120 bp Feature: domain Description: dctM Location: 21982-22120 bp Feature: gene Location: 22256-22513 bp Feature: gene Location: 22485-23684 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22674-23418 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22674 -234 18 bp Feature: gene Location: 23990-24505 bp Feature: gene Location: 24638-25561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dctM (TIGR00786), RVT-DGRs

Seq: CZBA01000022.1 Blautia obeum strain 2789STDY5834921 genome assembly, contig: SCcontig000022, whole genome shotgun sequence (66685 bp)
Overview 1 RT 1: 47238-52359 bp Neighborhood of RT #1 [47238, 52359] PRK14508 RVT-GII GIIM BID_2 Feature: gene Location: 47238-48737 bp Feature: domain Description: PRK14508 Location: 47241-48732 bp Feature: domain Description: PRK145 08 Location: 47241-48732 bp Feature: gene Location: 49124-49333 bp Feature: gene Location: 49628-50914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49919-50552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49919-5 05 5 2 bp Feature: domain Description: GIIM Note: maturase Location: 50633-50849 bp Feature: domain Description: GIIM Note: maturase Location: 5 0633-5 0849 bp Feature: gene Location: 51534-52226 bp Feature: domain Description: BID_2 Location: 51660-51864 bp Feature: domain Description: BID_2 Location: 5 1660-5 1864 bp Feature: gene Location: 52243-52359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14508 (4-alpha-glucanotransferase; Provisional), RVT-GII, GIIM (pfam08388), BID_2 (smart00635)

Seq: CZBA01000023.1 Blautia obeum strain 2789STDY5834921 genome assembly, contig: SCcontig000023, whole genome shotgun sequence (59295 bp)
Overview 1 RT 1: 53345-58244 bp Neighborhood of RT #1 [53345, 58273] PRK06811 SalY RVT-DGRs OmpR DUF2007 Feature: gene Location: 53345-53899 bp Feature: domain Description: PRK06811 Location: 53357-53894 bp Feature: domain Description: PRK06 811 Location: 53357-53894 bp Feature: gene Location: 54574-55800 bp Feature: domain Description: SalY Location: 55396-55765 bp Feature: domain Description: SalY Location: 55396 -5576 5 bp Feature: gene Location: 55797-56786 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55902-56655 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55902-56 6 55 bp Feature: gene Location: 56834-57265 bp Feature: domain Description: OmpR Location: 56843-57203 bp Feature: domain Description: OmpR Location: 56 843-57203 bp Feature: gene Location: 57446-58273 bp Feature: domain Description: DUF2007 Location: 58043-58244 bp Feature: domain Description: DUF2007 Location: 58043-58244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06811 (RNA polymerase factor sigma-70; Validated), SalY (COG0577), RVT-DGRs, OmpR (COG0745), DUF2007 (pfam09413)

Seq: CZBA01000004.1 Blautia obeum strain 2789STDY5834921 genome assembly, contig: SCcontig000004, whole genome shotgun sequence (201150 bp)
Overview 1 RT 1: 13715-19871 bp Neighborhood of RT #1 [13715, 20041] PrgI RVT-GII HNHc Maff2 VirD4 Feature: gene Location: 13715-14104 bp Feature: domain Description: PrgI Location: 13733-14003 bp Feature: domain Description: PrgI Location: 137 33-14003 bp Feature: gene Location: 14127-14999 bp Feature: gene Location: 15267-17147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15594-16332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15594-16332 bp Feature: domain Description: HNHc Note: nucleases Location: 16878-17031 bp Feature: domain Description: HNHc Note: nucleases Location: 1687 8-17 031 bp Feature: gene Location: 17873-18004 bp Feature: domain Description: Maff2 Location: 17876-18002 bp Feature: domain Description: Maff2 Location: 17 87 6-18002 bp Feature: gene Location: 18146-20041 bp Feature: domain Description: VirD4 Location: 18446-19871 bp Feature: domain Description: VirD4 Location: 18446-1987 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT-GII, HNHc (smart00507), Maff2 (pfam12750), VirD4 (COG3505)