myRT

myRT report for GCA_001405255.1_13414_6_57

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Seq: CYYB01000009.1 Bacteroides thetaiotaomicron strain 2789STDY5608873 genome assembly, contig: SCcontig000009, whole genome shotgun sequence (307281 bp)
Overview 1 RT 1: 228347-232639 bp Neighborhood of RT #1 [228347, 236787] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 228347-228589 bp Feature: gene Location: 228795-229280 bp Feature: gene Location: 229277-230581 bp Ori: CUN21682.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 229490-230084 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 229490-230084 bp Feature: gene Location: 230910-231083 bp Feature: gene Location: 231100-236787 bp Ori: CUN21693.1 Feature: domain Description: Laminin_G_3 Location: 231466-231574 bp Feature: domain Description: Laminin_G_3 Location: 231 466-231 574 bp Feature: domain Description: Laminin_G_3 Location: 232210-232639 bp Feature: domain Description: Laminin_G_3 Location: 23221 0-232639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: CYYB01000006.1 Bacteroides thetaiotaomicron strain 2789STDY5608873 genome assembly, contig: SCcontig000006, whole genome shotgun sequence (363637 bp)
Overview 1 RT 1: 102413-115172 bp Neighborhood of RT #1 [102413, 115172] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 102413-104212 bp Ori: CUN09254.1 Gene: rpsA Feature: domain Description: rpsA Location: 102482-104096 bp Feature: domain Description: rpsA Location: 102 482 -104096 bp Feature: gene Location: 104381-110203 bp Ori: CUN09269.1 Feature: domain Description: DUF4011 Location: 105536-106049 bp Feature: domain Description: DUF4011 Location: 105536-106049 bp Feature: domain Description: DEXXQc_SF1 Location: 106388-106931 bp Feature: domain Description: DEXXQc_SF1 Location: 106388-106931 bp Feature: domain Description: DEXXQc_SF1 Location: 107822-108575 bp Feature: domain Description: DEXXQc_SF1 Location: 10782 2 -108575 bp Feature: domain Description: TIGR00376 Location: 108704-109097 bp Feature: domain Description: TIGR00376 Location: 108704-109097 bp Feature: domain Description: MTES_1575 Location: 109247-109535 bp Feature: domain Description: MTES_1575 Location: 1092 47-109535 bp Feature: domain Description: DUF3320 Location: 109709-109853 bp Feature: domain Description: DUF332 0 Location: 109709-109853 bp Feature: gene Location: 110240-111373 bp Ori: CUN09285.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110564-111110 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110564-111110 bp Feature: gene Location: 111579-113765 bp Feature: gene Location: 114663-115172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons

Seq: CYYB01000013.1 Bacteroides thetaiotaomicron strain 2789STDY5608873 genome assembly, contig: SCcontig000013, whole genome shotgun sequence (159259 bp)
Overview 1 RT 1: 86979-94114 bp Neighborhood of RT #1 [86979, 94114] RVT-DGRs Feature: gene Location: 86979-88031 bp Feature: gene Location: 88044-88253 bp Feature: gene Location: 88278-89618 bp Ori: CUN27499.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 88485-89082 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 88485-89082 bp Feature: gene Location: 89904-92654 bp Feature: gene Location: 92660-94114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CYYB01000001.1 Bacteroides thetaiotaomicron strain 2789STDY5608873 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (784881 bp)
Overview 1 RT 1: 580402-592093 bp Neighborhood of RT #1 [580402, 592093] RVT-DGRs CotH LRR_AMN1 Feature: gene Location: 580402-580692 bp Feature: gene Location: 580901-581383 bp Feature: gene Location: 581383-582636 bp Ori: CUM76647.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 581548-582145 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58154 8-58214 5 bp Feature: gene Location: 583189-590754 bp Ori: CUM76657.1 Feature: domain Description: CotH Location: 587026-587914 bp Feature: domain Description: CotH Location: 587026-587914 bp Feature: domain Description: LRR_AMN1 Location: 588547-588973 bp Feature: domain Description: LRR_AMN1 Location: 58854 7-588973 bp Feature: gene Location: 590777-592093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CotH (pfam08757), LRR_AMN1 (sd00034)