myRT

myRT report for GCA_001405315.1_13470_2_60

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Seq: CYZO01000037.1 [Ruminococcus] torques strain 2789STDY5834841 genome assembly, contig: SCcontig000037, whole genome shotgun sequence (24083 bp)
Overview 1 RT 1: 4947-11631 bp Neighborhood of RT #1 [4947, 11657] RVT-GII GIIM Peptidase_M56 YbxI Penicillinase_R Feature: gene Location: 4947-5969 bp Feature: gene Location: 6026-7537 bp Feature: gene Location: 7985-9397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8336-8957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8336-8957 bp Feature: domain Description: GIIM Note: maturase Location: 9014-9230 bp Feature: domain Description: GIIM Note: maturase Location: 901 4-9230 bp Feature: gene Location: 9473-11269 bp Feature: domain Description: Peptidase_M56 Location: 9509-10400 bp Feature: domain Description: Peptidase_M56 Location: 9509-1 0400 bp Feature: domain Description: YbxI Location: 10550-11261 bp Feature: domain Description: YbxI Location: 1 0550-1 1 261 bp Feature: gene Location: 11271-11657 bp Feature: domain Description: Penicillinase_R Location: 11292-11631 bp Feature: domain Description: Penicillinase_R Location: 1 1 292-1 1 631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Peptidase_M56 (pfam05569), YbxI (COG2602)

Seq: CYZO01000026.1 [Ruminococcus] torques strain 2789STDY5834841 genome assembly, contig: SCcontig000026, whole genome shotgun sequence (50083 bp)
Overview 1 RT 1: 35891-44288 bp Neighborhood of RT #1 [35891, 44290] PLPDE_III_DapDC LytD RVT-GII Gph PRK05755 Feature: gene Location: 35891-37165 bp Feature: domain Description: PLPDE_III_DapDC Location: 35948-37058 bp Feature: domain Description: PLPDE_III_DapDC Location: 35948-37058 bp Feature: gene Location: 37919-39781 bp Feature: domain Description: LytD Location: 38576-39095 bp Feature: domain Description: LytD Location: 38576-39095 bp Feature: gene Location: 40324-40779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40534-40654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40534-40654 bp Feature: gene Location: 40941-41555 bp Feature: domain Description: Gph Location: 40944-41544 bp Feature: domain Description: Gph Location: 40944-41544 bp Feature: gene Location: 41675-44290 bp Feature: domain Description: PRK05755 Location: 41684-44288 bp Feature: domain Description: PRK05755 Location: 41684-442 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLPDE_III_DapDC (cd06828), LytD (COG4193), RVT-GII, Gph (COG0546), PRK05755 (DNA polymerase I; Provisional)

Seq: CYZO01000012.1 [Ruminococcus] torques strain 2789STDY5834841 genome assembly, contig: SCcontig000012, whole genome shotgun sequence (76443 bp)
Overview 1 RT 1: 21657-26539 bp Neighborhood of RT #1 [21657, 26604] T4SS-DNA_transf RVT-GII Intron_maturas2 T4SS-DNA_transf DUF4314 Feature: gene Location: 21657-22031 bp Feature: gene Location: 22063-22389 bp Feature: domain Description: T4SS-DNA_transf Location: 22081-22228 bp Feature: domain Description: T4SS-DNA_transf Location: 22081-22228 bp Feature: gene Location: 22572-24458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22905-23739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22905-23 73 9 bp Feature: domain Description: Intron_maturas2 Location: 23823-24165 bp Feature: domain Description: Intron_maturas2 Location: 23 823 -24165 bp Feature: gene Location: 24950-26071 bp Feature: domain Description: T4SS-DNA_transf Location: 25091-26012 bp Feature: domain Description: T4SS-DNA_transf Location: 25091-26012 bp Feature: gene Location: 26326-26604 bp Feature: domain Description: DUF4314 Location: 26344-26539 bp Feature: domain Description: DUF43 14 Location: 263 44-2653 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII, Intron_maturas2 (pfam01348), DUF4314 (pfam14192)