myRT

myRT report for GCA_001405455.1_13470_2_80

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Seq: CYZP01000036.1 Blautia obeum strain 2789STDY5834861 genome assembly, contig: SCcontig000036, whole genome shotgun sequence (37143 bp)
Overview 1 RT 1: 25227-32621 bp Neighborhood of RT #1 [25227, 33541] ArdA AAA_10 RVT-GII AAA_10 TrbL Feature: gene Location: 25227-25730 bp Feature: domain Description: ArdA Location: 25248-25716 bp Feature: domain Description: ArdA Location: 25248-2571 6 bp Feature: gene Location: 26225-27775 bp Feature: domain Description: AAA_10 Location: 27554-27737 bp Feature: domain Description: AAA_1 0 Location: 27554-27737 bp Feature: gene Location: 28472-30298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28772-29471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28772-29471 bp Feature: gene Location: 30510-31355 bp Feature: domain Description: AAA_10 Location: 30513-31317 bp Feature: domain Description: AAA_1 0 Location: 3051 3-31 31 7 bp Feature: gene Location: 31355-33541 bp Feature: domain Description: TrbL Location: 32258-32621 bp Feature: domain Description: TrbL Location: 32258-32621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), AAA_10 (pfam12846), RVT-GII, TrbL (pfam04610)

Seq: CYZP01000004.1 Blautia obeum strain 2789STDY5834861 genome assembly, contig: SCcontig000004, whole genome shotgun sequence (162721 bp)
Overview 1 RT 1: 46046-50810 bp Neighborhood of RT #1 [46046, 50857] PRK13857 RVT-GII Intron_maturas2 VirD4 DUF4314 Feature: gene Location: 46046-46405 bp Feature: domain Description: PRK13857 Location: 46160-46388 bp Feature: domain Description: PRK13857 Location: 46160-46388 bp Feature: gene Location: 46420-46650 bp Feature: gene Location: 46935-48608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47055-47889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47055-47889 bp Feature: domain Description: Intron_maturas2 Location: 47973-48360 bp Feature: domain Description: Intron_maturas2 Location: 47973-48360 bp Feature: gene Location: 49314-50669 bp Feature: domain Description: VirD4 Location: 49464-50640 bp Feature: domain Description: VirD4 Location: 49464-50640 bp Feature: gene Location: 50693-50857 bp Feature: domain Description: DUF4314 Location: 50696-50810 bp Feature: domain Description: DUF4314 Location: 50696-50810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13857 (pilin major subunit VirB2), RVT-GII, Intron_maturas2 (pfam01348), VirD4 (COG3505), DUF4314 (pfam14192)

Seq: CYZP01000071.1 Blautia obeum strain 2789STDY5834861 genome assembly, contig: SCcontig000071, whole genome shotgun sequence (3242 bp)
Overview 1 RT 1: 315-2637 bp Neighborhood of RT #1 [315, 2726] Y1_Tnp RVT-GII GIIM Feature: gene Location: 315-893 bp Feature: gene Location: 820-1119 bp Feature: domain Description: Y1_Tnp Location: 826-1093 bp Feature: domain Description: Y1_Tnp Location: 826-1093 bp Feature: gene Location: 1353-2726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1671-2364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1671-23 64 bp Feature: domain Description: GIIM Note: maturase Location: 2427-2637 bp Feature: domain Description: GIIM Note: maturase Location: 2427-263 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Y1_Tnp (pfam01797)

Seq: CYZP01000024.1 Blautia obeum strain 2789STDY5834861 genome assembly, contig: SCcontig000024, whole genome shotgun sequence (63856 bp)
Overview 1 RT 1: 576-3672 bp Neighborhood of RT #1 [576, 4199] TnpV RVT-GII GIIM GAT1_Peptidase_E OAD_beta Feature: gene Location: 576-959 bp Feature: domain Description: TnpV Location: 627-951 bp Feature: domain Description: TnpV Location: 627-951 bp Feature: gene Location: 1475-2773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1730-2423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1730-24 23 bp Feature: domain Description: GIIM Note: maturase Location: 2483-2702 bp Feature: domain Description: GIIM Note: maturase Location: 24 83-2702 bp Feature: gene Location: 2884-3501 bp Feature: domain Description: GAT1_Peptidase_E Location: 2902-3364 bp Feature: domain Description: GAT1_Peptidase_E Location: 2902-3364 bp Feature: gene Location: 3549-4199 bp Feature: domain Description: OAD_beta Location: 3564-3672 bp Feature: domain Description: OAD_beta Location: 3564 -3672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GAT1_Peptidase_E (cd03146), OAD_beta (pfam03977), TnpV (pfam14198)

Seq: CYZP01000002.1 Blautia obeum strain 2789STDY5834861 genome assembly, contig: SCcontig000002, whole genome shotgun sequence (217280 bp)
Overview 1 RT 1: 165049-170137 bp Neighborhood of RT #1 [165049, 170137] XRE HipB COG2932 RVT_N RVT-GII GIIM LexA_DNA_bind Feature: gene Location: 165049-165249 bp Feature: domain Description: XRE Location: 165061-165244 bp Feature: domain Description: XRE Location: 165 061-165 244 bp Feature: gene Location: 165306-166037 bp Feature: domain Description: HipB Location: 165318-165534 bp Feature: domain Description: HipB Location: 165 318-165 5 34 bp Feature: domain Description: COG2932 Location: 165690-166002 bp Feature: domain Description: COG2932 Location: 165 690-166002 bp Feature: gene Location: 166864-168333 bp Feature: RT Description: RVT_N Location: 166909-167146 bp Feature: RT Description: RVT_N Location: 166909-167146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167197-167845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167197-167845 bp Feature: domain Description: GIIM Note: maturase Location: 167896-168130 bp Feature: domain Description: GIIM Note: maturase Location: 167896-168130 bp Feature: gene Location: 169673-169885 bp Feature: domain Description: LexA_DNA_bind Location: 169682-169871 bp Feature: domain Description: LexA_DNA_bind Location: 169682-169871 bp Feature: gene Location: 169898-170137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), HipB (COG1396), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LexA_DNA_bind (pfam01726)