myRT

myRT report for GCA_001405495.1_13414_6_9

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Seq: CYZB01000013.1 Catenibacterium mitsuokai strain 2789STDY5608825 genome assembly, contig: SCcontig000013, whole genome shotgun sequence (104120 bp)
Overview 1 RT 1: 28413-36234 bp Neighborhood of RT #1 [28413, 36317] PRK12838 carB RVT-GII GIIM GIIM Tdk HAD_BPGM-like Feature: gene Location: 28413-29480 bp Feature: domain Description: PRK12838 Location: 28416-29472 bp Feature: domain Description: PRK1 2838 Location: 2841 6-29472 bp Feature: gene Location: 29482-32679 bp Feature: domain Description: carB Location: 29485-32653 bp Feature: domain Description: carB Location: 29485-32653 bp Feature: gene Location: 33376-34812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33616-34237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3361 6-34237 bp Feature: domain Description: GIIM Note: maturase Location: 34309-34438 bp Feature: domain Description: GIIM Note: maturase Location: 34309-34438 bp Feature: domain Description: GIIM Note: maturase Location: 34489-34570 bp Feature: domain Description: GIIM Note: maturase Location: 34489-34570 bp Feature: gene Location: 34904-35539 bp Feature: domain Description: Tdk Location: 34925-35489 bp Feature: domain Description: Tdk Location: 34925-35489 bp Feature: gene Location: 35673-36317 bp Feature: domain Description: HAD_BPGM-like Location: 35685-36234 bp Feature: domain Description: HAD_BPGM-like Location: 35685-36234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12838 (carbamoyl phosphate synthase small subunit; Reviewed), carB (PRK12815), RVT-GII, GIIM (pfam08388), Tdk (COG1435), HAD_BPGM-like (cd16423)

Seq: CYZB01000001.1 Catenibacterium mitsuokai strain 2789STDY5608825 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (686615 bp)
Overview 1 RT 1: 68328-74348 bp Neighborhood of RT #1 [68328, 74356] RVT-CRISPR-like PagL MACS_AAE_MA_like Feature: gene Location: 68328-68519 bp Feature: gene Location: 68853-69191 bp Feature: gene Location: 69434-70708 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 69641-70283 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 69641-702 83 bp Feature: gene Location: 71231-72481 bp Feature: domain Description: PagL Location: 71600-71903 bp Feature: domain Description: PagL Location: 71600-71903 bp Feature: gene Location: 72701-74356 bp Feature: domain Description: MACS_AAE_MA_like Location: 72743-74348 bp Feature: domain Description: MACS_AAE_MA_like Location: 72 743-74348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, PagL (pfam09411), MACS_AAE_MA_like (cd05970)

Seq: CYZB01000055.1 Catenibacterium mitsuokai strain 2789STDY5608825 genome assembly, contig: SCcontig000055, whole genome shotgun sequence (19345 bp)
Overview 1 RT 1: 17219-19102 bp Neighborhood of RT #1 [17219, 19155] GAF KptA RVT-GII Feature: gene Location: 17219-17680 bp Feature: domain Description: GAF Location: 17228-17657 bp Feature: domain Description: GAF Location: 17228-17657 bp Feature: gene Location: 17656-18045 bp Feature: domain Description: KptA Location: 17668-17986 bp Feature: domain Description: KptA Location: 17668-17986 bp Feature: gene Location: 18517-19155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18718-19102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18718-19102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAF (smart00065), KptA (COG1859), RVT-GII

Seq: CYZB01000098.1 Catenibacterium mitsuokai strain 2789STDY5608825 genome assembly, contig: SCcontig000098, whole genome shotgun sequence (9128 bp)
Overview 1 RT 1: 158-3453 bp Neighborhood of RT #1 [158, 3461] RVT-GII GIIM KptA FeoA FeoB Feature: gene Location: 158-754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164-281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164 -281 bp Feature: domain Description: GIIM Note: maturase Location: 341-554 bp Feature: domain Description: GIIM Note: maturase Location: 34 1-554 bp Feature: gene Location: 915-1052 bp Feature: domain Description: KptA Location: 921-1050 bp Feature: domain Description: KptA Location: 921-1050 bp Feature: gene Location: 1116-3461 bp Feature: domain Description: FeoA Location: 1119-1329 bp Feature: domain Description: FeoA Location: 1119-1329 bp Feature: domain Description: FeoB Location: 1461-3453 bp Feature: domain Description: FeoB Location: 14 61-34 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FeoA (smart00899), FeoB (COG0370), RVT-GII, GIIM (pfam08388), KptA (COG1859)