myRT

myRT report for GCA_001405735.1_14207_7_66

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Seq: CZBG01000003.1 Bacteroides ovatus strain 2789STDY5834943 genome assembly, contig: SCcontig000003, whole genome shotgun sequence (475349 bp)
Overview 1 RT 1: 297270-301458 bp Neighborhood of RT #1 [297270, 301458] SSB_OBF RVT_N RVT-GII GIIM Feature: gene Location: 297270-297656 bp Feature: domain Description: SSB_OBF Location: 297294-297582 bp Feature: domain Description: SSB_OBF Location: 297294-297582 bp Feature: gene Location: 297693-297878 bp Feature: gene Location: 298440-299942 bp Feature: RT Description: RVT_N Location: 298506-298749 bp Feature: RT Description: RVT_N Location: 298506-298749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298794-299436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298794-299436 bp Feature: domain Description: GIIM Note: maturase Location: 299493-299724 bp Feature: domain Description: GIIM Note: maturase Location: 299493-299724 bp Feature: gene Location: 300676-300858 bp Feature: gene Location: 300874-301458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CZBG01000027.1 Bacteroides ovatus strain 2789STDY5834943 genome assembly, contig: SCcontig000027, whole genome shotgun sequence (78121 bp)
Overview 1 RT 1: 64959-77226 bp Neighborhood of RT #1 [64959, 77351] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons PDDEXK_2 Feature: gene Location: 64959-66761 bp Feature: domain Description: rpsA Location: 65028-66645 bp Feature: domain Description: rpsA Location: 6502 8-66645 bp Feature: gene Location: 66858-72815 bp Feature: domain Description: DUF4011 Location: 68088-68601 bp Feature: domain Description: DUF4011 Location: 68088-68601 bp Feature: domain Description: DEXXQc_SF1 Location: 68940-69906 bp Feature: domain Description: DEXXQc_SF1 Location: 68940-69906 bp Feature: domain Description: DEXXQc_SF1 Location: 70368-71127 bp Feature: domain Description: DEXXQc_SF1 Location: 70368-7112 7 bp Feature: domain Description: TIGR00376 Location: 71259-71646 bp Feature: domain Description: TIGR00376 Location: 712 59-71646 bp Feature: domain Description: MTES_1575 Location: 71799-72084 bp Feature: domain Description: MTES_1575 Location: 71799-72 084 bp Feature: domain Description: DUF3320 Location: 72324-72465 bp Feature: domain Description: DUF332 0 Location: 72 32 4-72 465 bp Feature: gene Location: 72817-73947 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73138-73681 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73138-73681 bp Feature: gene Location: 74153-76264 bp Feature: gene Location: 76527-77351 bp Feature: domain Description: PDDEXK_2 Location: 76548-77226 bp Feature: domain Description: PDDEXK_2 Location: 76548-772 2 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons, PDDEXK_2 (pfam12784)