myRT

myRT report for GCA_001405935.1_13414_6_56

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Seq: CYXP01000001.1 Parabacteroides distasonis strain 2789STDY5608872 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (1273521 bp)
Overview 1 RT 1: 1113117-1123987 bp Neighborhood of RT #1 [1113117, 1123998] PRK13351 COG4646 Helicase_C matK RVT-GII Intron_maturas2 N6_Mtase N6_Mtase COG4646 Feature: gene Location: 1113117-1115042 bp Feature: domain Description: PRK13351 Location: 1113120-1114974 bp Feature: domain Description: PRK1 3351 Location: 1 1 1 31 20-1 1 1 4974 bp Feature: gene Location: 1115700-1118438 bp Feature: domain Description: COG4646 Location: 1115787-1116927 bp Feature: domain Description: COG4646 Location: 1 1 1 5787-1 1 1 6927 bp Feature: domain Description: Helicase_C Location: 1117140-1117338 bp Feature: domain Description: Helicase_C Location: 1 1 1 71 40-1 1 1 7338 bp Feature: gene Location: 1118452-1120254 bp Feature: domain Description: matK Location: 1118521-1118608 bp Feature: domain Description: matK Location: 1 1 1 8521 -1 1 1 8608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118716-1119538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 871 6-1 1 1 9538 bp Feature: domain Description: Intron_maturas2 Location: 1119688-1119922 bp Feature: domain Description: Intron_maturas2 Location: 1 1 1 9688-1 1 1 9922 bp Feature: gene Location: 1120360-1120635 bp Feature: gene Location: 1120807-1123998 bp Feature: domain Description: N6_Mtase Location: 1121119-1121227 bp Feature: domain Description: N6_Mtase Location: 1 1 21 1 1 9-1 1 21 227 bp Feature: domain Description: N6_Mtase Location: 1121365-1121722 bp Feature: domain Description: N6_Mtase Location: 1 1 21 365-1 1 21 722 bp Feature: domain Description: COG4646 Location: 1123051-1123987 bp Feature: domain Description: COG4646 Location: 1 1 23051 -1 1 23987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13351 (elongation factor G-like protein), COG4646 (Adenine-specific DNA methylase, N12 class ), Helicase_C (pfam00271), matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348), N6_Mtase (pfam02384)