myRT

myRT report for GCA_001406095.1_13414_6_48

Download annotations/find similar RTs

Seq: CYYO01000007.1 Bacteroides uniformis strain 2789STDY5608864 genome assembly, contig: SCcontig000007, whole genome shotgun sequence (289408 bp)
Overview 1 RT 1: 129265-134606 bp Neighborhood of RT #1 [129265, 138727] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 129265-129507 bp Feature: gene Location: 129687-130172 bp Feature: gene Location: 130169-131473 bp Ori: CUO31065.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 130382-130976 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 30382-1 30976 bp Feature: gene Location: 131799-131993 bp Feature: gene Location: 131990-138727 bp Ori: CUO31114.1 Feature: domain Description: Laminin_G_3 Location: 133451-133529 bp Feature: domain Description: Laminin_G_3 Location: 1 33451 -1 33529 bp Feature: domain Description: Laminin_G_3 Location: 134180-134606 bp Feature: domain Description: Laminin_G_3 Location: 1 341 80-1 34606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: CYYO01000003.1 Bacteroides uniformis strain 2789STDY5608864 genome assembly, contig: SCcontig000003, whole genome shotgun sequence (523289 bp)
Overview 1 RT 1: 271171-276078 bp Neighborhood of RT #1 [271171, 276078] RVT-UG27 Feature: gene Location: 271171-271470 bp Feature: gene Location: 271473-272135 bp Feature: gene Location: 272162-273424 bp Ori: CUN77955.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 272351-272987 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 72 351-2 72 987 bp Feature: gene Location: 274510-274968 bp Feature: gene Location: 274987-276078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CYYO01000005.1 Bacteroides uniformis strain 2789STDY5608864 genome assembly, contig: SCcontig000005, whole genome shotgun sequence (358755 bp)
Overview 1 RT 1: 248830-254347 bp Neighborhood of RT #1 [248830, 254347] SSB_OBF SSB_OBF DUF1738 RVT-GII Intron_maturas2 Feature: gene Location: 248830-249438 bp Ori: CUO11971.1 Feature: domain Description: SSB_OBF Location: 248848-249058 bp Feature: domain Description: SSB_OBF Location: 248848-249058 bp Feature: domain Description: SSB_OBF Location: 249154-249319 bp Feature: domain Description: SSB_OBF Location: 249154-2493 19 bp Feature: gene Location: 249444-249947 bp Ori: CUO11996.1 Feature: domain Description: DUF1738 Location: 249498-249915 bp Feature: domain Description: DUF173 8 Location: 249498-249915 bp Feature: gene Location: 250511-252322 bp Ori: CUO12035.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250775-251597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250775-251597 bp Feature: domain Description: Intron_maturas2 Location: 251738-251978 bp Feature: domain Description: Intron_maturas2 Location: 25173 8-251978 bp Feature: gene Location: 253704-254078 bp Feature: gene Location: 254090-254347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348)