myRT

myRT report for GCA_001406255.1_14207_7_93

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Seq: CYXN01000005.1 Faecalibacterium prausnitzii strain 2789STDY5834970 genome assembly, contig: SCcontig000005, whole genome shotgun sequence (140127 bp)
Overview 1 RT 1: 33379-38014 bp Neighborhood of RT #1 [33379, 38014] DUF2313 DUF3751 RVT-DGRs Feature: gene Location: 33379-34248 bp Feature: domain Description: DUF2313 Location: 33397-33751 bp Feature: domain Description: DUF231 3 Location: 33397-33751 bp Feature: gene Location: 34269-36083 bp Feature: domain Description: DUF3751 Location: 34287-34719 bp Feature: domain Description: DUF3751 Location: 34287-3471 9 bp Feature: gene Location: 36509-37621 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36701-37442 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36701 -37442 bp Feature: gene Location: 37624-37887 bp Feature: gene Location: 37904-38014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2313 (pfam10076), DUF3751 (pfam12571), RVT-DGRs

Seq: CYXN01000010.1 Faecalibacterium prausnitzii strain 2789STDY5834970 genome assembly, contig: SCcontig000010, whole genome shotgun sequence (93424 bp)
Overview 1 RT 1: 58958-69889 bp Neighborhood of RT #1 [58958, 69889] MobC COG4646 KOG0390 RVT-GII HNHc MutS_I YtxK COG4646 Feature: gene Location: 58958-59290 bp Feature: domain Description: MobC Location: 59153-59252 bp Feature: domain Description: MobC Location: 59153-592 52 bp Feature: gene Location: 59287-61236 bp Feature: domain Description: COG4646 Location: 59290-59848 bp Feature: domain Description: COG4646 Location: 592 90-59848 bp Feature: domain Description: KOG0390 Location: 60124-60388 bp Feature: domain Description: KOG0390 Location: 6012 4-60388 bp Feature: gene Location: 61463-63379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61787-62501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61787-62 501 bp Feature: domain Description: HNHc Note: nucleases Location: 63131-63302 bp Feature: domain Description: HNHc Note: nucleases Location: 63131-63302 bp Feature: gene Location: 64079-69415 bp Feature: domain Description: MutS_I Location: 65681-65924 bp Feature: domain Description: MutS_I Location: 65681-6592 4 bp Feature: domain Description: YtxK Location: 66569-67319 bp Feature: domain Description: YtxK Location: 66569-67319 bp Feature: domain Description: COG4646 Location: 67379-69401 bp Feature: domain Description: COG4646 Location: 67379-69401 bp Feature: gene Location: 69497-69889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT-GII, HNHc (smart00507), MutS_I (pfam01624), YtxK (COG0827)