myRT

myRT report for GCA_001406375.1_14207_7_91

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Seq: CYXM01000053.1 Agathobacter rectalis strain 2789STDY5834968 genome assembly, contig: SCcontig000053, whole genome shotgun sequence (1905 bp)
Overview 1 RT 1: 22-451 bp Neighborhood of RT #1 [22, 624] RVT-GII GIIM Feature: gene Location: 22-624 bp Ori: CUN31250.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28-172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28-1 72 bp Feature: domain Description: GIIM Note: maturase Location: 229-451 bp Feature: domain Description: GIIM Note: maturase Location: 229-451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CYXM01000001.1 Agathobacter rectalis strain 2789STDY5834968 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (448468 bp)
Overview 1 RT 1: 262286-264923 bp Neighborhood of RT #1 [262286, 264931] RVT-DGRs Avd_like Feature: gene Location: 262286-262666 bp Feature: gene Location: 262679-263035 bp Feature: gene Location: 263014-264159 bp Ori: CUM72851.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 263227-263893 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 632 2 7-2 63893 bp Feature: gene Location: 264147-264548 bp Feature: gene Location: 264587-264931 bp Ori: CUM72890.1 Feature: domain Description: Avd_like Location: 264611-264923 bp Feature: domain Description: Avd_like Location: 2 64611-2 6492 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: CYXM01000019.1 Agathobacter rectalis strain 2789STDY5834968 genome assembly, contig: SCcontig000019, whole genome shotgun sequence (63231 bp)
Overview 1 RT 1: 59374-63037 bp Neighborhood of RT #1 [59374, 63210] M3B_PepF PRK12353 RVT-GII GIIM Feature: gene Location: 59374-61179 bp Ori: CUN27001.1 Gene: pepF1 Feature: domain Description: M3B_PepF Location: 59485-61162 bp Feature: domain Description: M3 B_PepF Location: 59485-61162 bp Feature: gene Location: 61300-62232 bp Ori: CUN27008.1 Gene: arcC1 Feature: domain Description: PRK12353 Location: 61309-62230 bp Feature: domain Description: PRK123 53 Location: 613 09-6223 0 bp Feature: gene Location: 62608-63210 bp Ori: CUN27016.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62614-62758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62614-62758 bp Feature: domain Description: GIIM Note: maturase Location: 62815-63037 bp Feature: domain Description: GIIM Note: maturase Location: 62815-63 03 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M3B_PepF (cd09610), PRK12353 (putative amino acid kinase; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CYXM01000004.1 Agathobacter rectalis strain 2789STDY5834968 genome assembly, contig: SCcontig000004, whole genome shotgun sequence (252941 bp)
Overview 1 RT 1: 31635-34557 bp Neighborhood of RT #1 [31635, 35075] DUF16 RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 31635-31943 bp Ori: CUM90191.1 Feature: domain Description: DUF16 Location: 31650-31836 bp Feature: domain Description: DUF16 Location: 31650-31836 bp Feature: gene Location: 31984-32202 bp Feature: gene Location: 32204-33232 bp Ori: CUM90227.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32414-33014 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 324 14 -33014 bp Feature: gene Location: 33511-33846 bp Ori: CUM90241.1 Feature: domain Description: Avd_like Location: 33529-33835 bp Feature: domain Description: Avd_like Location: 33529-33835 bp Feature: gene Location: 33990-35075 bp Ori: CUM90262.1 Feature: domain Description: FGE-sulfatase Location: 34197-34557 bp Feature: domain Description: FGE-sulfatase Location: 34 197-34 557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF16 (pfam01519), RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)

Seq: CYXM01000008.1 Agathobacter rectalis strain 2789STDY5834968 genome assembly, contig: SCcontig000008, whole genome shotgun sequence (172406 bp)
Overview 1 RT 1: 1838-11356 bp Neighborhood of RT #1 [1838, 11361] DUF4145 HsdR RVT-UG3 RVT-UG8 DUF2971 IS285 Feature: gene Location: 1838-5254 bp Ori: CUN07329.1 Gene: hsdR_3 Feature: domain Description: DUF4145 Location: 1910-2183 bp Feature: domain Description: DUF4145 Location: 1910-2183 bp Feature: domain Description: HsdR Location: 2450-5156 bp Feature: domain Description: HsdR Location: 245 0-5 15 6 bp Feature: gene Location: 5259-5864 bp Feature: gene Location: 5890-7218 bp Ori: CUN07378.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6190-6655 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6190-665 5 bp Feature: gene Location: 7359-9401 bp Ori: CUN07396.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 7884-8325 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 7884-8325 bp Feature: gene Location: 9417-10358 bp Ori: CUN07417.1 Feature: domain Description: DUF2971 Location: 9876-10158 bp Feature: domain Description: DUF2971 Location: 9876-1015 8 bp Feature: gene Location: 11080-11361 bp Ori: CUN07439.1 Feature: domain Description: IS285 Location: 11086-11356 bp Feature: domain Description: IS285 Location: 11086-1135 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4145 (pfam13643), HsdR (COG4096), RVT-UG3, RVT-UG8, DUF2971 (pfam11185), IS285 (COG3328)