myRT

myRT report for GCA_001406435.1_14207_7_83

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Seq: CYXZ01000065.1 Roseburia intestinalis strain 2789STDY5834960 genome assembly, contig: SCcontig000065, whole genome shotgun sequence (4747 bp)
Overview 1 RT 1: 69-4613 bp Neighborhood of RT #1 [69, 4642] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 69-1373 bp Feature: domain Description: SR_TndX_transposase Location: 75-210 bp Feature: domain Description: SR_TndX_transposase Location: 75-21 0 bp Feature: domain Description: Recombinase Location: 306-675 bp Feature: domain Description: Recombinase Location: 306-675 bp Feature: domain Description: Zn_ribbon_recom Location: 708-882 bp Feature: domain Description: Zn_ribbon_recom Location: 708-882 bp Feature: domain Description: DUF4368 Location: 1161-1362 bp Feature: domain Description: DUF4368 Location: 1 1 61 -1 362 bp Feature: gene Location: 1560-2234 bp Feature: gene Location: 2810-4642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3074-3905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3074-3905 bp Feature: domain Description: Intron_maturas2 Location: 3977-4292 bp Feature: domain Description: Intron_maturas2 Location: 3977-4292 bp Feature: domain Description: HNHc Note: nucleases Location: 4439-4613 bp Feature: domain Description: HNHc Note: nucleases Location: 4439-461 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)