myRT

myRT report for GCA_001406515.1_14207_7_78

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Seq: CZBQ01000001.1 Clostridium paraputrificum strain 2789STDY5834955 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (405035 bp)
Overview 1 RT 1: 210151-213910 bp Neighborhood of RT #1 [210151, 213936] HTH_XRE TPR_12 TPR_12 TPR_12 TPR GIIM RVT-GII YtxH Feature: gene Location: 210151-211452 bp Feature: domain Description: HTH_XRE Location: 210172-210340 bp Feature: domain Description: HTH_XRE Location: 21 01 72-21 0340 bp Feature: domain Description: TPR_12 Location: 210376-210565 bp Feature: domain Description: TPR_1 2 Location: 21 0376-21 0565 bp Feature: domain Description: TPR_12 Location: 210622-210808 bp Feature: domain Description: TPR_1 2 Location: 21 0622-21 0808 bp Feature: domain Description: TPR_12 Location: 210862-211075 bp Feature: domain Description: TPR_1 2 Location: 21 0862-21 1 075 bp Feature: domain Description: TPR Location: 211102-211411 bp Feature: domain Description: TPR Location: 21 1 1 02-21 1 41 1 bp Feature: gene Location: 212113-212220 bp Feature: domain Description: GIIM Note: maturase Location: 212131-212215 bp Feature: domain Description: GIIM Note: maturase Location: 21 21 31 -21 221 5 bp Feature: gene Location: 212278-212889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212281-212842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 2281 -21 2842 bp Feature: gene Location: 213031-213231 bp Feature: gene Location: 213763-213936 bp Feature: domain Description: YtxH Location: 213781-213910 bp Feature: domain Description: YtxH Location: 21 3781 -21 391 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), TPR_12 (pfam13424), TPR (smart00028), GIIM (pfam08388), RVT-GII, YtxH (pfam12732)