myRT

myRT report for GCA_001406615.2_14207_7_53-2

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Seq: CZBH02000005.1 Faecalibacterium prausnitzii strain 2789STDY5834930 genome assembly, contig: 14207_753SCcontig000005, whole genome shotgun sequence (288747 bp)
Overview 1 RT 1: 216686-222323 bp Neighborhood of RT #1 [216686, 222391] DUF1738 MPTase-PolyVal RVT-GII Intron_maturas2 DUF1738 SSB_OBF SSB_OBF Feature: gene Location: 216686-217480 bp Feature: gene Location: 218130-219212 bp Ori: VDR36095.1 Gene: traC_2 Feature: domain Description: DUF1738 Location: 218256-218532 bp Feature: domain Description: DUF1 738 Location: 21 8256-21 8532 bp Feature: domain Description: MPTase-PolyVal Location: 218694-219009 bp Feature: domain Description: MPTase-PolyVal Location: 21 8694-21 9009 bp Feature: gene Location: 219205-221022 bp Ori: VDR36096.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219481-220303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 9481 -220303 bp Feature: domain Description: Intron_maturas2 Location: 220480-220702 bp Feature: domain Description: Intron_maturas2 Location: 220480-220702 bp Feature: gene Location: 221556-221774 bp Ori: VDR36097.1 Feature: domain Description: DUF1738 Location: 221610-221760 bp Feature: domain Description: DUF1 738 Location: 221 61 0-221 760 bp Feature: gene Location: 221780-222391 bp Ori: VDR36098.1 Feature: domain Description: SSB_OBF Location: 221798-222005 bp Feature: domain Description: SSB_OBF Location: 221 798-222005 bp Feature: domain Description: SSB_OBF Location: 222107-222323 bp Feature: domain Description: SSB_OBF Location: 2221 07-222323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), MPTase-PolyVal (pfam18818), RVT-GII, Intron_maturas2 (pfam01348), SSB_OBF (cd04496)

Seq: CZBH02000004.1 Faecalibacterium prausnitzii strain 2789STDY5834930 genome assembly, contig: 14207_753SCcontig000004, whole genome shotgun sequence (342170 bp)
Overview 1 RT 1: 258905-263909 bp Neighborhood of RT #1 [258905, 263909] RVT-UG27 Feature: gene Location: 258905-259996 bp Feature: gene Location: 260009-260470 bp Feature: gene Location: 261327-262589 bp Ori: VDR35818.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 261519-262155 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 61519-2 62 155 bp Feature: gene Location: 262582-263232 bp Feature: gene Location: 263268-263909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CZBH02000002.1 Faecalibacterium prausnitzii strain 2789STDY5834930 genome assembly, contig: 14207_753SCcontig000002, whole genome shotgun sequence (557752 bp)
Overview 1 RT 1: 859-4745 bp Neighborhood of RT #1 [859, 4745] Avd_like RVT-DGRs DUF5106 Thioredoxin_8 Feature: gene Location: 859-1383 bp Feature: gene Location: 1396-1749 bp Ori: VDR34697.1 Feature: domain Description: Avd_like Location: 1423-1729 bp Feature: domain Description: Avd_like Location: 1423 -1729 bp Feature: gene Location: 2228-3487 bp Ori: VDR34698.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2444-3167 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2444-3 167 bp Feature: gene Location: 3508-4506 bp Ori: VDR34699.1 Feature: domain Description: DUF5106 Location: 3619-4075 bp Feature: domain Description: DUF5106 Location: 3 619-4075 bp Feature: domain Description: Thioredoxin_8 Location: 4156-4438 bp Feature: domain Description: Thioredoxin_8 Location: 4156-443 8 bp Feature: gene Location: 4512-4745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, DUF5106 (pfam17127), Thioredoxin_8 (pfam13905)