myRT

myRT report for GCA_001406635.1_13470_2_63

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Seq: CZAD01000001.1 Bacteroides uniformis strain 2789STDY5834844 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (358176 bp)
Overview 1 RT 1: 243647-246960 bp Neighborhood of RT #1 [243647, 247031] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 243647-244531 bp Feature: gene Location: 244575-244919 bp Feature: gene Location: 245176-246210 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 245383-246067 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 245383-246067 bp Feature: gene Location: 246188-246559 bp Feature: gene Location: 246561-247031 bp Feature: domain Description: Phage_holin_4_1 Location: 246648-246960 bp Feature: domain Description: Phage_holin_4_1 Location: 246648-246960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: CZAD01000011.1 Bacteroides uniformis strain 2789STDY5834844 genome assembly, contig: SCcontig000011, whole genome shotgun sequence (125043 bp)
Overview 1 RT 1: 29246-35075 bp 2 RT 2: 59939-65651 bp Neighborhood of RT #1 [29246, 35086] matK RVT-GII Intron_maturas2 N6_Mtase COG4646 Neighborhood of RT #2 [59939, 66118] DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM DUF3876 DUF4141 Feature: gene Location: 29246-31048 bp Feature: domain Description: matK Location: 29315-29402 bp Feature: domain Description: matK Location: 2 9315-2 9402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29510-30332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9510-30332 bp Feature: domain Description: Intron_maturas2 Location: 30482-30716 bp Feature: domain Description: Intron_maturas2 Location: 30482 -30716 bp Feature: gene Location: 31154-31429 bp Feature: gene Location: 31601-35086 bp Feature: domain Description: N6_Mtase Location: 31892-32531 bp Feature: domain Description: N6_Mtase Location: 31892 -32 531 bp Feature: domain Description: COG4646 Location: 34139-35075 bp Feature: domain Description: COG4646 Location: 34139-35075 bp Feature: gene Location: 59939-60262 bp Feature: domain Description: DUF4133 Location: 59954-60221 bp Feature: domain Description: DUF4133 Location: 59954-602 2 1 bp Feature: gene Location: 60259-61197 bp Feature: domain Description: Bac_Flav_CT_G Location: 60262-61183 bp Feature: domain Description: Bac_Flav_CT_G Location: 602 62 -61183 bp Feature: gene Location: 61781-63442 bp Feature: RT Description: RVT_N Location: 61835-62078 bp Feature: RT Description: RVT_N Location: 61835-62 078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62123-62771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 12 3-62 771 bp Feature: domain Description: GIIM Note: maturase Location: 62825-63056 bp Feature: domain Description: GIIM Note: maturase Location: 62 82 5-63056 bp Feature: gene Location: 65148-65462 bp Feature: domain Description: DUF3876 Location: 65202-65451 bp Feature: domain Description: DUF3876 Location: 652 02 -65451 bp Feature: gene Location: 65498-66118 bp Feature: domain Description: DUF4141 Location: 65513-65651 bp Feature: domain Description: DUF4141 Location: 65513-65651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388), DUF3876 (pfam12992)
DUF4141 (pfam13605)

Seq: CZAD01000008.1 Bacteroides uniformis strain 2789STDY5834844 genome assembly, contig: SCcontig000008, whole genome shotgun sequence (140134 bp)
Overview 1 RT 1: 51654-57074 bp Neighborhood of RT #1 [51654, 57163] RVT-GII Intron_maturas2 DUF1738 SSB_OBF SSB_OBF Feature: gene Location: 51654-51908 bp Feature: gene Location: 51923-52297 bp Feature: gene Location: 53671-55482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53935-54757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 93 5-54757 bp Feature: domain Description: Intron_maturas2 Location: 54898-55138 bp Feature: domain Description: Intron_maturas2 Location: 54898-5513 8 bp Feature: gene Location: 56046-56549 bp Feature: domain Description: DUF1738 Location: 56100-56517 bp Feature: domain Description: DUF173 8 Location: 56100-56517 bp Feature: gene Location: 56555-57163 bp Feature: domain Description: SSB_OBF Location: 56573-56783 bp Feature: domain Description: SSB_OBF Location: 56573 -56783 bp Feature: domain Description: SSB_OBF Location: 56876-57074 bp Feature: domain Description: SSB_OBF Location: 56876-57074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), DUF1738 (pfam08401), SSB_OBF (cd04496)