myRT

myRT report for GCA_001406835.1_T1815

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Seq: CVRQ01000001.1 [Eubacterium] rectale strain T1-815 genome assembly, contig: T1815_10, whole genome shotgun sequence (90807 bp)
Overview 1 RT 1: 83165-88399 bp Neighborhood of RT #1 [83165, 88437] Maff2 VirD4 RVT-GII VirD4 DUF3801 Feature: gene Location: 83165-83323 bp Feature: domain Description: Maff2 Location: 83168-83318 bp Feature: domain Description: Maff2 Location: 831 68-8331 8 bp Feature: gene Location: 83416-84456 bp Feature: domain Description: VirD4 Location: 83533-84283 bp Feature: domain Description: VirD4 Location: 83533-84283 bp Feature: gene Location: 84663-86570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84996-85740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84996-85740 bp Feature: gene Location: 87204-87995 bp Feature: domain Description: VirD4 Location: 87444-87951 bp Feature: domain Description: VirD4 Location: 87444-87951 bp Feature: gene Location: 87982-88437 bp Feature: domain Description: DUF3801 Location: 88039-88399 bp Feature: domain Description: DUF3801 Location: 88039-88399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), VirD4 (COG3505), RVT-GII, DUF3801 (pfam12687)

Seq: CVRQ01000025.1 [Eubacterium] rectale strain T1-815 genome assembly, contig: T1815_31, whole genome shotgun sequence (187316 bp)
Overview 1 RT 1: 88688-92364 bp Neighborhood of RT #1 [88688, 92609] Phage_XkdX RVT-DGRs Mtd_N Feature: gene Location: 88688-88927 bp Feature: gene Location: 88924-89076 bp Feature: domain Description: Phage_XkdX Location: 88945-89056 bp Feature: domain Description: Phage_XkdX Location: 88945-89056 bp Feature: gene Location: 89229-90527 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89481-90186 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89481-90186 bp Feature: gene Location: 90985-92223 bp Feature: gene Location: 92223-92609 bp Feature: domain Description: Mtd_N Location: 92247-92364 bp Feature: domain Description: Mtd_N Location: 92 2 47-92 364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, Mtd_N (pfam18454)

Seq: CVRQ01000033.1 [Eubacterium] rectale strain T1-815 genome assembly, contig: T1815_39, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 77-1286 bp Neighborhood of RT #1 [77, 1471] RVT-GII GIIM Feature: gene Location: 77-1471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 95-1019 bp Feature: domain Description: GIIM Note: maturase Location: 1076-1286 bp Feature: domain Description: GIIM Note: maturase Location: 1076-1286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)