myRT

myRT report for GCA_001410775.1_12216_4_46

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Seq: CZPE01000010.1 Salmonella enterica subsp. enterica serovar Weltevreden genome assembly 12216_4#46, scaffold .12216_4_46.10, whole genome shotgun sequence (145386 bp)
Overview 1 RT 1: 44613-48789 bp Neighborhood of RT #1 [44613, 48789] PRK10473 RVT-Retrons Feature: gene Location: 44613-45800 bp Feature: domain Description: PRK10473 Location: 44616-45792 bp Feature: domain Description: PRK1 0473 Location: 4461 6-45792 bp Feature: gene Location: 46145-46354 bp Feature: gene Location: 46602-47537 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46713-47298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4671 3-47298 bp Feature: gene Location: 47537-48499 bp Feature: gene Location: 48526-48789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: CZPE01000015.1 Salmonella enterica subsp. enterica serovar Weltevreden genome assembly 12216_4#46, scaffold .12216_4_46.15, whole genome shotgun sequence (127222 bp)
Overview 1 RT 1: 1166-8019 bp Neighborhood of RT #1 [1166, 8021] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 1166-1711 bp Feature: gene Location: 1714-3414 bp Feature: domain Description: 5 Location: 2938-3232 bp Feature: domain Description: 5 Location: 2 938-32 32 bp Feature: gene Location: 4321-5085 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4444-4897 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4444-4897 bp Feature: gene Location: 5409-5915 bp Feature: domain Description: PRK10201 Location: 5412-5910 bp Feature: domain Description: PRK102 01 Location: 5412 -5910 bp Feature: gene Location: 6039-8021 bp Feature: domain Description: PRK05658 Location: 6177-8019 bp Feature: domain Description: PRK05658 Location: 6177-8019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)