myRT

myRT report for GCA_001414735.1_ASM141473v1

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Seq: LLFL01000038.1 Acinetobacter baumannii strain ABBL066 contig-37, whole genome shotgun sequence (165848 bp)
Overview 1 RT 1: 84808-90373 bp Neighborhood of RT #1 [84808, 90429] TetR_N RVT-Retrons PaaD PaaY Feature: gene Location: 84808-85410 bp Feature: domain Description: TetR_N Location: 84856-84979 bp Feature: domain Description: TetR_N Location: 84856-84979 bp Feature: gene Location: 86398-87624 bp Feature: gene Location: 87830-89002 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88085-88739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88085-88739 bp Feature: gene Location: 89363-89746 bp Feature: domain Description: PaaD Location: 89405-89738 bp Feature: domain Description: PaaD Location: 89405-89738 bp Feature: gene Location: 89824-90429 bp Feature: domain Description: PaaY Location: 89833-90373 bp Feature: domain Description: PaaY Location: 89833-90373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)

Seq: LLFL01000030.1 Acinetobacter baumannii strain ABBL066 contig-28, whole genome shotgun sequence (234562 bp)
Overview 1 RT 1: 127704-134098 bp Neighborhood of RT #1 [127704, 134124] TIGR02646 COG3950 RVT-Retrons CirA COG5515 Feature: gene Location: 127704-128345 bp Feature: domain Description: TIGR02646 Location: 127803-128172 bp Feature: domain Description: TIGR02 646 Location: 12 7803-12 8172 bp Feature: gene Location: 128350-129894 bp Feature: domain Description: COG3950 Location: 128524-129673 bp Feature: domain Description: COG3950 Location: 12 852 4-12 9673 bp Feature: gene Location: 129895-130770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 129934-130534 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 9934-130534 bp Feature: gene Location: 131493-133682 bp Feature: domain Description: CirA Location: 131586-133680 bp Feature: domain Description: CirA Location: 131586-133680 bp Feature: gene Location: 133912-134124 bp Feature: domain Description: COG5515 Location: 133915-134098 bp Feature: domain Description: COG5515 Location: 133915-134098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, CirA (COG1629), COG5515 (Uncharacterized protein )