myRT

myRT report for GCA_001414815.1_ASM141481v1

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Seq: LLFB01000001.1 Acinetobacter baumannii strain ABBL056 contig-10, whole genome shotgun sequence (28564 bp)
Overview 1 RT 1: 55-6201 bp Neighborhood of RT #1 [55, 6374] DDE_Tnp_4 CirA RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 55-318 bp Feature: domain Description: DDE_Tnp_4 Location: 58-301 bp Feature: domain Description: DDE_Tnp_4 Location: 58-301 bp Feature: gene Location: 396-2585 bp Feature: domain Description: CirA Location: 489-2583 bp Feature: domain Description: CirA Location: 489-2583 bp Feature: gene Location: 3308-4183 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3347-3947 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3347-3947 bp Feature: gene Location: 4184-5728 bp Feature: domain Description: COG3950 Location: 4358-5507 bp Feature: domain Description: COG3950 Location: 4358-5507 bp Feature: gene Location: 5733-6374 bp Feature: domain Description: TIGR02646 Location: 5832-6201 bp Feature: domain Description: TIGR02646 Location: 5832-6201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CirA (COG1629), COG3950 (Predicted ATP-binding protein involved in virulence ), DDE_Tnp_4 (pfam13359)

Seq: LLFB01000080.1 Acinetobacter baumannii strain ABBL056 contig-71, whole genome shotgun sequence (184455 bp)
Overview 1 RT 1: 94609-99799 bp Neighborhood of RT #1 [94609, 100230] PaaY PaaD RVT-Retrons TetR_N Feature: gene Location: 94609-95214 bp Feature: domain Description: PaaY Location: 94618-95158 bp Feature: domain Description: PaaY Location: 94618-95158 bp Feature: gene Location: 95292-95675 bp Feature: domain Description: PaaD Location: 95334-95667 bp Feature: domain Description: PaaD Location: 95334-95667 bp Feature: gene Location: 96036-97208 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96291-96945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 962 91-96945 bp Feature: gene Location: 97414-98640 bp Feature: gene Location: 99628-100230 bp Feature: domain Description: TetR_N Location: 99676-99799 bp Feature: domain Description: TetR_N Location: 99676-99799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PaaY (TIGR02287), PaaD (TIGR02286), RVT-Retrons, TetR_N (pfam00440)