myRT

myRT report for GCA_001417735.1_ASM141773v1

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Seq: BBUZ01000050.1 Streptomyces sp. NBRC 110028 DNA, contig: scaffold00029, whole genome shotgun sequence (65092 bp)
Overview 1 RT 1: 59250-65039 bp Neighborhood of RT #1 [59250, 65089] GAF_2 PAS_3 GAF_2 SpoIIE HATPase_RsbW-like InsE RVT-GII PHA02517 npdG Feature: gene Location: 59250-62006 bp Feature: domain Description: GAF_2 Location: 59334-59817 bp Feature: domain Description: GAF_2 Location: 59334-5981 7 bp Feature: domain Description: PAS_3 Location: 59961-60219 bp Feature: domain Description: PAS_3 Location: 59961 -6021 9 bp Feature: domain Description: GAF_2 Location: 60408-60828 bp Feature: domain Description: GAF_2 Location: 60408-60828 bp Feature: domain Description: SpoIIE Location: 60999-61605 bp Feature: domain Description: SpoIIE Location: 60999-61 605 bp Feature: domain Description: HATPase_RsbW-like Location: 61737-61974 bp Feature: domain Description: HATPase_RsbW-like Location: 61 737-61 974 bp Feature: gene Location: 62266-62526 bp Feature: domain Description: InsE Location: 62278-62500 bp Feature: domain Description: InsE Location: 62278-62500 bp Feature: gene Location: 63028-63873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63244-63646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63244-63646 bp Feature: gene Location: 63877-64722 bp Feature: domain Description: PHA02517 Location: 63901-64696 bp Feature: domain Description: PHA0251 7 Location: 63901 -64696 bp Feature: gene Location: 64784-65089 bp Feature: domain Description: npdG Location: 64790-65039 bp Feature: domain Description: npdG Location: 64790-65039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAF_2 (pfam13185), PAS_3 (pfam08447), SpoIIE (pfam07228), HATPase_RsbW-like (cd16936), InsE (COG2963), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), npdG (TIGR01915)