myRT

myRT report for GCA_001418705.1_ASM141870v1

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Seq: LKHR01000044.1 Vibrio fluvialis strain S1110 contig0044, whole genome shotgun sequence (30996 bp)
Overview 1 RT 1: 2932-9381 bp Neighborhood of RT #1 [2932, 9398] COG4190 HTH_XRE RVT-Retrons PRK05658 DnaG Feature: gene Location: 2932-3312 bp Ori: KQH90212.1 Feature: domain Description: COG4190 Location: 2959-3274 bp Feature: domain Description: COG41 90 Location: 2959-3274 bp Feature: gene Location: 3891-4196 bp Ori: KQH90213.1 Feature: domain Description: HTH_XRE Location: 3906-4068 bp Feature: domain Description: HTH_XRE Location: 3906-4068 bp Feature: gene Location: 4177-5136 bp Ori: KQH90214.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4351-4906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4351 -4906 bp Feature: gene Location: 5678-7555 bp Ori: KQH90215.1 Feature: domain Description: PRK05658 Location: 5684-7553 bp Feature: domain Description: PRK05658 Location: 5684-7553 bp Feature: gene Location: 7653-9398 bp Ori: KQH90216.1 Gene: dnaG Feature: domain Description: DnaG Location: 7668-9381 bp Feature: domain Description: DnaG Location: 7668-9381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4190 (Predicted transcriptional regulator ), HTH_XRE (smart00530), RVT-Retrons, PRK05658 (RNA polymerase sigma factor RpoD; Validated), DnaG (COG0358)