myRT

myRT report for GCA_001420335.1_ASM142033v1

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Seq: LMBO01000017.1 Acinetobacter baumannii strain Ab23 contig00017, whole genome shotgun sequence (85579 bp)
Overview 1 RT 1: 22319-28564 bp Neighborhood of RT #1 [22319, 28737] COG5515 CirA RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 22319-22531 bp Feature: domain Description: COG5515 Location: 22322-22505 bp Feature: domain Description: COG551 5 Location: 22322-22505 bp Feature: gene Location: 22826-24949 bp Feature: domain Description: CirA Location: 22859-24947 bp Feature: domain Description: CirA Location: 22859-24947 bp Feature: gene Location: 25671-26546 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25710-26310 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2571 0-2631 0 bp Feature: gene Location: 26547-28091 bp Feature: domain Description: COG3950 Location: 26721-27870 bp Feature: domain Description: COG3950 Location: 26721 -27870 bp Feature: gene Location: 28096-28737 bp Feature: domain Description: TIGR02646 Location: 28195-28564 bp Feature: domain Description: TIGR02646 Location: 281 95-28564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5515 (Uncharacterized protein ), CirA (COG1629), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: LMBO01000010.1 Acinetobacter baumannii strain Ab23 contig00010, whole genome shotgun sequence (126306 bp)
Overview 1 RT 1: 84376-89941 bp Neighborhood of RT #1 [84376, 89997] TetR_N RVT-Retrons PaaD PaaY Feature: gene Location: 84376-84978 bp Feature: domain Description: TetR_N Location: 84424-84547 bp Feature: domain Description: TetR_N Location: 8442 4-84547 bp Feature: gene Location: 85966-87192 bp Feature: gene Location: 87398-88570 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87653-88307 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87653-88307 bp Feature: gene Location: 88931-89314 bp Feature: domain Description: PaaD Location: 88973-89306 bp Feature: domain Description: PaaD Location: 88973-89306 bp Feature: gene Location: 89392-89997 bp Feature: domain Description: PaaY Location: 89401-89941 bp Feature: domain Description: PaaY Location: 89401-89941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)