myRT

myRT report for GCA_001422125.1_Leaf85

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Seq: LMME01000022.1 Methylobacterium sp. Leaf85 contig_29, whole genome shotgun sequence (13561 bp)
Overview 1 RT 1: 7953-12726 bp Neighborhood of RT #1 [7953, 13187] N6_Mtase Resolvase Recombinase RVT-CRISPR-like Feature: gene Location: 7953-9608 bp Ori: KQO49547.1 Feature: domain Description: N6_Mtase Location: 7977-8610 bp Feature: domain Description: N6_Mtase Location: 7977-861 0 bp Feature: gene Location: 9950-10639 bp Ori: KQO49550.1 Feature: domain Description: Resolvase Location: 9974-10379 bp Feature: domain Description: Resolvase Location: 9974-1 0379 bp Feature: domain Description: Recombinase Location: 10520-10625 bp Feature: domain Description: Recombinase Location: 1 0520-1 0625 bp Feature: gene Location: 12231-13187 bp Ori: KQO49548.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 12291-12726 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 2291 -1 2726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), Resolvase (smart00857), Recombinase (pfam07508), RVT-CRISPR

Seq: LMME01000014.1 Methylobacterium sp. Leaf85 contig_21, whole genome shotgun sequence (45904 bp)
Overview 1 RT 1: 22265-31917 bp Neighborhood of RT #1 [22265, 31928] WGR_DNA_ligase MarR_2 RVT-Retrons OafA PRK06179 Feature: gene Location: 22265-25411 bp Ori: KQO51219.1 Feature: domain Description: WGR_DNA_ligase Location: 22286-22517 bp Feature: domain Description: WGR_DNA_ligase Location: 2 2 2 86-2 2 517 bp Feature: gene Location: 25408-27072 bp Ori: KQO51220.1 Feature: domain Description: MarR_2 Location: 26566-26695 bp Feature: domain Description: MarR_2 Location: 2 6566-2 6695 bp Feature: gene Location: 27389-29197 bp Ori: KQO51221.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27935-28553 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7935-2 8553 bp Feature: gene Location: 29451-30545 bp Ori: KQO51222.1 Feature: domain Description: OafA Location: 29457-30483 bp Feature: domain Description: OafA Location: 2 9457-30483 bp Feature: gene Location: 31107-31928 bp Ori: KQO51223.1 Feature: domain Description: PRK06179 Location: 31125-31917 bp Feature: domain Description: PRK06179 Location: 3112 5-31917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), MarR_2 (pfam12802), RVT-Retrons, OafA (COG1835), PRK06179 (short chain dehydrogenase; Provisional)