myRT

myRT report for GCA_001422245.1_Leaf262

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Seq: LMMM01000001.1 Rhizobium sp. Leaf262 contig_1, whole genome shotgun sequence (804259 bp)
Overview 1 RT 1: 384007-390199 bp Neighborhood of RT #1 [384007, 390210] HTH_XRE RVT-Retrons COG4530 cmk Feature: gene Location: 384007-386751 bp Feature: gene Location: 387427-387714 bp Ori: KQO83566.1 Feature: domain Description: HTH_XRE Location: 387439-387601 bp Feature: domain Description: HTH_XRE Location: 387439-387601 bp Feature: gene Location: 387715-388623 bp Ori: KQO83567.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 387865-388405 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 387865-388405 bp Feature: gene Location: 388959-389345 bp Ori: KQO83568.1 Feature: domain Description: COG4530 Location: 388962-389340 bp Feature: domain Description: COG4530 Location: 388962-389340 bp Feature: gene Location: 389578-390210 bp Ori: KQO83569.1 Feature: domain Description: cmk Location: 389584-390199 bp Feature: domain Description: cmk Location: 389584-3901 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, COG4530 (Uncharacterized protein ), cmk (TIGR00017)

Seq: LMMM01000017.1 Rhizobium sp. Leaf262 contig_5, whole genome shotgun sequence (250648 bp)
Overview 1 RT 1: 25542-30561 bp Neighborhood of RT #1 [25542, 30561] PRK02406 RVT-Retrons Feature: gene Location: 25542-26603 bp Ori: KQO76290.1 Feature: domain Description: PRK02406 Location: 25572-26577 bp Feature: domain Description: PRK02 406 Location: 2 5572 -2 6577 bp Feature: gene Location: 26766-27599 bp Feature: gene Location: 27733-29019 bp Ori: KQO76106.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28132-28741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 8132 -2 8741 bp Feature: gene Location: 29051-30307 bp Feature: gene Location: 30376-30561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02406 (DNA polymerase IV; Validated), RVT-Retrons