myRT

myRT report for GCA_001422605.1_Leaf53

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Seq: LMLK01000003.1 Erwinia sp. Leaf53 contig_11, whole genome shotgun sequence (410551 bp)
Overview 1 RT 1: 198271-213512 bp Neighborhood of RT #1 [198271, 213829] dacD RVT-Retrons Peptidase_S74 COG4733 ILEI PRK09039 ILEI COG4733 Feature: gene Location: 198271-198549 bp Feature: gene Location: 198615-199793 bp Ori: KQN63809.1 Feature: domain Description: dacD Location: 198624-199788 bp Feature: domain Description: dacD Location: 1 98624-1 99788 bp Feature: gene Location: 200993-202828 bp Ori: KQN63615.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 201128-201824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 201 1 28-201 824 bp Feature: gene Location: 203776-204819 bp Ori: KQN63616.1 Feature: domain Description: Peptidase_S74 Location: 204487-204643 bp Feature: domain Description: Peptidase_S74 Location: 204487-204643 bp Feature: gene Location: 204836-213829 bp Ori: KQN63617.1 Feature: domain Description: COG4733 Location: 204872-207710 bp Feature: domain Description: COG4733 Location: 204872-20771 0 bp Feature: domain Description: ILEI Location: 208718-208994 bp Feature: domain Description: ILEI Location: 20871 8-208994 bp Feature: domain Description: PRK09039 Location: 209885-212189 bp Feature: domain Description: PRK09039 Location: 209885-21 21 89 bp Feature: domain Description: ILEI Location: 212348-212585 bp Feature: domain Description: ILEI Location: 21 2348-21 2585 bp Feature: domain Description: COG4733 Location: 212888-213512 bp Feature: domain Description: COG4733 Location: 21 2888-21 351 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-Retrons, Peptidase_S74 (pfam13884), COG4733 (Phage-related protein, tail component ), ILEI (pfam15711), PRK09039 (peptidoglycan -binding protein)

Seq: LMLK01000022.1 Erwinia sp. Leaf53 contig_4, whole genome shotgun sequence (547179 bp)
Overview 1 RT 1: 56235-61705 bp Neighborhood of RT #1 [56235, 61878] ALDH_CALDH_CalB GATase1_Hsp31_like RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 56235-57653 bp Ori: KQN55421.1 Feature: domain Description: ALDH_CALDH_CalB Location: 56262-57558 bp Feature: domain Description: ALDH_CALDH_CalB Location: 562 62 -57558 bp Feature: gene Location: 57667-58347 bp Ori: KQN55422.1 Feature: domain Description: GATase1_Hsp31_like Location: 57676-58336 bp Feature: domain Description: GATase1_Hsp31_like Location: 57676-58336 bp Feature: gene Location: 58662-59594 bp Ori: KQN55423.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58764-59361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58764-59361 bp Feature: gene Location: 59591-61246 bp Ori: KQN55424.1 Feature: domain Description: COG3950 Location: 59789-61160 bp Feature: domain Description: COG3950 Location: 59789-61160 bp Feature: gene Location: 61243-61878 bp Ori: KQN55425.1 Feature: domain Description: TIGR02646 Location: 61315-61705 bp Feature: domain Description: TIGR02 646 Location: 61315-61705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_CALDH_CalB (cd07133), GATase1_Hsp31_like (cd03141), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)