myRT

myRT report for GCA_001424085.1_Leaf386

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Seq: LMQF01000024.1 Rhizobium sp. Leaf386 contig_31, whole genome shotgun sequence (218371 bp)
Overview 1 RT 1: 200928-207653 bp Neighborhood of RT #1 [200928, 207653] COG5654 INT_Cre_C RVT-Retrons Feature: gene Location: 200928-201455 bp Ori: KQS95591.1 Feature: domain Description: COG5654 Location: 200967-201444 bp Feature: domain Description: COG5654 Location: 200967-201 444 bp Feature: gene Location: 201603-202751 bp Ori: KQS95592.1 Feature: domain Description: INT_Cre_C Location: 202173-202743 bp Feature: domain Description: INT_Cre_C Location: 2021 73-202743 bp Feature: gene Location: 204328-205470 bp Ori: KQS95593.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 204598-205198 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 204598-2051 98 bp Feature: gene Location: 205632-206930 bp Feature: gene Location: 206946-207653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5654 (Uncharacterized conserved protein, contains RES domain ), INT_Cre_C (cd00799), RVT-Retrons

Seq: LMQF01000023.1 Rhizobium sp. Leaf386 contig_30, whole genome shotgun sequence (21375 bp)
Overview 1 RT 1: 59-4647 bp Neighborhood of RT #1 [59, 4652] RVT-UNC INT_C_like_1 YggE Feature: gene Location: 59-1600 bp Ori: KQS95690.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 605-1163 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 605-1163 bp Feature: gene Location: 1922-3577 bp Ori: KQS95691.1 Feature: domain Description: INT_C_like_1 Location: 2963-3485 bp Feature: domain Description: INT_C_like_1 Location: 2 963-3485 bp Feature: gene Location: 3909-4652 bp Ori: KQS95692.1 Feature: domain Description: YggE Location: 3933-4647 bp Feature: domain Description: YggE Location: 3933-4647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-GII(RVT-UNC), INT_C_like_1 (cd01184), YggE (COG2968)