myRT

myRT report for GCA_001425265.1_Root418

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Seq: LMEC01000020.1 Massilia sp. Root418 contig_3, whole genome shotgun sequence (1289054 bp)
Overview 1 RT 1: 199118-204732 bp Neighborhood of RT #1 [199118, 204737] DUF4440 Acetyltransf_1 RVT-Retrons COG2936 YXWGXW TSP3 Feature: gene Location: 199118-199531 bp Ori: KQW93279.1 Feature: domain Description: DUF4440 Location: 199175-199490 bp Feature: domain Description: DUF4440 Location: 1 991 75-1 99490 bp Feature: gene Location: 199636-200022 bp Ori: KQW94088.1 Feature: domain Description: Acetyltransf_1 Location: 199729-199960 bp Feature: domain Description: Acetyltransf_1 Location: 1 99729-1 99960 bp Feature: gene Location: 200602-201957 bp Ori: KQW93280.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 201085-201724 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 201 085-201 724 bp Feature: gene Location: 202188-204056 bp Ori: KQW94089.1 Feature: domain Description: COG2936 Location: 202260-204048 bp Feature: domain Description: COG2936 Location: 202260-204048 bp Feature: gene Location: 204327-204737 bp Ori: KQW93281.1 Feature: domain Description: YXWGXW Location: 204462-204537 bp Feature: domain Description: YXWGXW Location: 204462-204537 bp Feature: domain Description: TSP3 Location: 204627-204732 bp Feature: domain Description: TSP3 Location: 204627-204732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4440 (pfam14534), Acetyltransf_1 (pfam00583), RVT-Retrons, COG2936 (Predicted acyl esterase ), YXWGXW (pfam12779), TSP3 (sd00002)

Seq: LMEC01000011.1 Massilia sp. Root418 contig_2, whole genome shotgun sequence (1129651 bp)
Overview 1 RT 1: 969075-973535 bp Neighborhood of RT #1 [969075, 973552] Dcm RVT-DGRs Avd_like DUF1566 Feature: gene Location: 969075-969578 bp Feature: gene Location: 969613-971190 bp Ori: KQW97109.1 Feature: domain Description: Dcm Location: 969661-971146 bp Feature: domain Description: Dcm Location: 969661-971146 bp Feature: gene Location: 971187-972350 bp Ori: KQW97110.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 971436-972123 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 971436-972 12 3 bp Feature: gene Location: 972557-972928 bp Ori: KQW97111.1 Feature: domain Description: Avd_like Location: 972584-972890 bp Feature: domain Description: Avd_like Location: 972 584-972 890 bp Feature: gene Location: 972941-973552 bp Ori: KQW97112.1 Feature: domain Description: DUF1566 Location: 973298-973535 bp Feature: domain Description: DUF1566 Location: 9732 98-973535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)