myRT

myRT report for GCA_001425825.1_Root1238

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Seq: LMDM01000012.1 Rhizobacter sp. Root1238 contig_2, whole genome shotgun sequence (288482 bp)
Overview 1 RT 1: 29344-35125 bp Neighborhood of RT #1 [29344, 35160] GdhA ubiA RVT-Retrons DUF2214 prfC Feature: gene Location: 29344-30642 bp Ori: KQW11071.1 Feature: domain Description: GdhA Location: 29413-30637 bp Feature: domain Description: GdhA Location: 2941 3-30637 bp Feature: gene Location: 30652-31527 bp Ori: KQW10870.1 Feature: domain Description: ubiA Location: 30682-31516 bp Feature: domain Description: ubiA Location: 30682-31 51 6 bp Feature: gene Location: 31539-32879 bp Ori: KQW10871.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32001-32637 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32001 -32637 bp Feature: gene Location: 33058-33507 bp Ori: KQW11072.1 Feature: domain Description: DUF2214 Location: 33067-33502 bp Feature: domain Description: DUF221 4 Location: 33067-33502 bp Feature: gene Location: 33532-35160 bp Ori: KQW10872.1 Gene: prfC Feature: domain Description: prfC Location: 33544-35125 bp Feature: domain Description: prfC Location: 33544-351 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GdhA (COG0334), ubiA (PRK13595), RVT-Retrons, DUF2214 (pfam09980), prfC (TIGR00503)