myRT

myRT report for GCA_001426595.1_Root434

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Seq: LMEK01000001.1 Variovorax sp. Root434 contig_1, whole genome shotgun sequence (766064 bp)
Overview 1 RT 1: 425114-432018 bp Neighborhood of RT #1 [425114, 432026] PRK08163 RVT-Retrons YhcG YhcG_C DUF3375 Feature: gene Location: 425114-426298 bp Ori: KQX39462.1 Feature: domain Description: PRK08163 Location: 425126-426248 bp Feature: domain Description: PRK081 63 Location: 4251 26-426248 bp Feature: gene Location: 426472-427710 bp Feature: gene Location: 427781-429166 bp Ori: KQX39464.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 428279-428915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 428279-42891 5 bp Feature: gene Location: 429517-430575 bp Ori: KQX39465.1 Feature: domain Description: YhcG Location: 429601-429895 bp Feature: domain Description: YhcG Location: 429601 -429895 bp Feature: domain Description: YhcG_C Location: 430057-430516 bp Feature: domain Description: YhcG_C Location: 430057-43051 6 bp Feature: gene Location: 430572-432026 bp Ori: KQX39466.1 Feature: domain Description: DUF3375 Location: 430605-432018 bp Feature: domain Description: DUF3375 Location: 430605-43201 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08163 (3-hydroxybenzoate 6-monooxygenase), RVT-Retrons, YhcG (COG4804), YhcG_C, DUF3375 (pfam11855)

Seq: LMEK01000028.1 Variovorax sp. Root434 contig_8, whole genome shotgun sequence (200254 bp)
Overview 1 RT 1: 25288-34622 bp Neighborhood of RT #1 [25288, 34651] HEAT_2 HEAT_2 HEAT_2 RVT-Retrons PhnO PhnO RIO1 Feature: gene Location: 25288-28452 bp Ori: KQX19798.1 Feature: domain Description: HEAT_2 Location: 25624-25837 bp Feature: domain Description: HEAT_2 Location: 2 562 4-2 5837 bp Feature: domain Description: HEAT_2 Location: 26890-27100 bp Feature: domain Description: HEAT_2 Location: 2 6890-2 7100 bp Feature: domain Description: HEAT_2 Location: 27172-27361 bp Feature: domain Description: HEAT_2 Location: 2 7172 -2 7361 bp Feature: gene Location: 28449-30140 bp Feature: gene Location: 30418-32370 bp Ori: KQX19800.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30997-31615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30997-31615 bp Feature: gene Location: 32730-33803 bp Ori: KQX19801.1 Feature: domain Description: PhnO Location: 32922-33204 bp Feature: domain Description: PhnO Location: 32 92 2 -332 04 bp Feature: domain Description: PhnO Location: 33411-33747 bp Feature: domain Description: PhnO Location: 33411-33747 bp Feature: gene Location: 33800-34651 bp Ori: KQX19802.1 Feature: domain Description: RIO1 Location: 33821-34622 bp Feature: domain Description: RIO1 Location: 3382 1-3462 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT-Retrons, PhnO (COG0454), RIO1 (pfam01163)