myRT

myRT report for GCA_001427305.1_Root1480D1

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Seq: LMFZ01000021.1 Duganella sp. Root1480D1 contig_28, whole genome shotgun sequence (32262 bp)
Overview 1 RT 1: 3950-13562 bp Neighborhood of RT #1 [3950, 14509] PRK09695 M4_TLP RVT-Retrons SWIM WGR_DNA_ligase HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 3950-5662 bp Ori: KQZ33207.1 Feature: domain Description: PRK09695 Location: 3953-5654 bp Feature: domain Description: PRK09695 Location: 3953-5654 bp Feature: gene Location: 5873-7600 bp Ori: KQZ33208.1 Feature: domain Description: M4_TLP Location: 6722-7580 bp Feature: domain Description: M4_TLP Location: 6722-7580 bp Feature: gene Location: 7661-9538 bp Ori: KQZ33209.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8222-8831 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8222-8831 bp Feature: gene Location: 9846-11486 bp Ori: KQZ33210.1 Feature: domain Description: SWIM Location: 11346-11460 bp Feature: domain Description: SWIM Location: 1 1 346-1 1 460 bp Feature: gene Location: 11483-14509 bp Ori: KQZ33211.1 Feature: domain Description: WGR_DNA_ligase Location: 11510-11654 bp Feature: domain Description: WGR_DNA_ligase Location: 1 1 51 0-1 1 654 bp Feature: domain Description: HEAT_2 Location: 11750-12008 bp Feature: domain Description: HEAT_2 Location: 1 1 750-1 2008 bp Feature: domain Description: HEAT_2 Location: 12476-12578 bp Feature: domain Description: HEAT_2 Location: 1 2476-1 2578 bp Feature: domain Description: HEAT_2 Location: 13316-13562 bp Feature: domain Description: HEAT_2 Location: 1 331 6-1 3562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09695 (glycolate permease GlcA), M4_TLP (cd09597), RVT-Retrons, SWIM (pfam04434), WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646)

Seq: LMFZ01000001.1 Duganella sp. Root1480D1 contig_1, whole genome shotgun sequence (687606 bp)
Overview 1 RT 1: 594407-599750 bp Neighborhood of RT #1 [594407, 599860] PRK11675 PRK00124 RVT-Retrons PRK06814 Feature: gene Location: 594407-594676 bp Ori: KQZ45231.1 Feature: domain Description: PRK11675 Location: 594509-594668 bp Feature: domain Description: PRK11675 Location: 594509-594668 bp Feature: gene Location: 595049-595507 bp Ori: KQZ45232.1 Feature: domain Description: PRK00124 Location: 595052-595490 bp Feature: domain Description: PRK0012 4 Location: 595052 -595490 bp Feature: gene Location: 595548-596915 bp Ori: KQZ45233.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 596043-596682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 596043-596682 bp Feature: gene Location: 597136-597855 bp Feature: gene Location: 597974-599860 bp Ori: KQZ45235.1 Feature: domain Description: PRK06814 Location: 597992-599750 bp Feature: domain Description: PRK06814 Location: 597992 -599750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11675 (LexA regulated protein; Provisional), PRK00124 (YaiI/YqxD family protein), RVT-Retrons, PRK06814 (acyl---phospholipid O-acyltransferase)