myRT

myRT report for GCA_001429205.1_Root9

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Seq: LMIY01000022.1 Pseudomonas sp. Root9 contig_29, whole genome shotgun sequence (39297 bp)
Overview 1 RT 1: 27892-34848 bp Neighborhood of RT #1 [27892, 34848] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM ACR3 Feature: gene Location: 27892-28227 bp Feature: domain Description: TnpB_IS66 Location: 27910-28198 bp Feature: domain Description: TnpB_IS66 Location: 2791 0-281 98 bp Feature: gene Location: 28289-29602 bp Feature: domain Description: LZ_Tnp_IS66 Location: 28421-28628 bp Feature: domain Description: LZ_Tnp_IS66 Location: 28421 -28628 bp Feature: domain Description: zf-IS66 Location: 28667-28781 bp Feature: domain Description: zf-IS66 Location: 28667-28781 bp Feature: domain Description: DDE_Tnp_IS66 Location: 28823-29597 bp Feature: domain Description: DDE_Tnp_IS66 Location: 28823-29597 bp Feature: gene Location: 30175-31836 bp Feature: RT Description: RVT_N Location: 30220-30463 bp Feature: RT Description: RVT_N Location: 30220-30463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30508-31144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30508-31 1 44 bp Feature: domain Description: GIIM Note: maturase Location: 31201-31429 bp Feature: domain Description: GIIM Note: maturase Location: 31 201 -31 429 bp Feature: gene Location: 32201-33163 bp Feature: domain Description: ACR3 Location: 32216-33143 bp Feature: domain Description: ACR3 Location: 3221 6-331 43 bp Feature: gene Location: 34558-34848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ACR3 (COG0798)